Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TCRBV5S1A1TA0A578 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TCRBV5S1A1TA0A578 AC067852.2-201ENST00000590513 2313 ntBASIC19.14■□□□□ 0.65
TCRBV5S1A1TA0A578 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.14■□□□□ 0.65
TCRBV5S1A1TA0A578 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TCRBV5S1A1TA0A578 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TCRBV5S1A1TA0A578 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TCRBV5S1A1TA0A578 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.13■□□□□ 0.65
TCRBV5S1A1TA0A578 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.13■□□□□ 0.65
TCRBV5S1A1TA0A578 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
TCRBV5S1A1TA0A578 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
TCRBV5S1A1TA0A578 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TCRBV5S1A1TA0A578 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TCRBV5S1A1TA0A578 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TCRBV5S1A1TA0A578 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TCRBV5S1A1TA0A578 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
TCRBV5S1A1TA0A578 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TCRBV5S1A1TA0A578 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TCRBV5S1A1TA0A578 SPDYE15P-201ENST00000424157 909 ntBASIC19.13■□□□□ 0.65
TCRBV5S1A1TA0A578 AC117947.1-201ENST00000427448 529 ntBASIC19.13■□□□□ 0.65
TCRBV5S1A1TA0A578 AL137013.1-201ENST00000432946 1228 ntBASIC19.13■□□□□ 0.65
TCRBV5S1A1TA0A578 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.13■□□□□ 0.65
TCRBV5S1A1TA0A578 RASA4DP-201ENST00000460726 1199 ntBASIC19.13■□□□□ 0.65
TCRBV5S1A1TA0A578 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TCRBV5S1A1TA0A578 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TCRBV5S1A1TA0A578 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.13■□□□□ 0.65
TCRBV5S1A1TA0A578 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.13■□□□□ 0.65
TCRBV5S1A1TA0A578 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TCRBV5S1A1TA0A578 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.13■□□□□ 0.65
TCRBV5S1A1TA0A578 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TCRBV5S1A1TA0A578 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TCRBV5S1A1TA0A578 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.13■□□□□ 0.65
TCRBV5S1A1TA0A578 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.13■□□□□ 0.65
TCRBV5S1A1TA0A578 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TCRBV5S1A1TA0A578 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TCRBV5S1A1TA0A578 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.13■□□□□ 0.65
TCRBV5S1A1TA0A578 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
TCRBV5S1A1TA0A578 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TCRBV5S1A1TA0A578 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TCRBV5S1A1TA0A578 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
TCRBV5S1A1TA0A578 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
TCRBV5S1A1TA0A578 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TCRBV5S1A1TA0A578 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.12■□□□□ 0.65
TCRBV5S1A1TA0A578 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.12■□□□□ 0.65
TCRBV5S1A1TA0A578 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
TCRBV5S1A1TA0A578 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TCRBV5S1A1TA0A578 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.12■□□□□ 0.65
TCRBV5S1A1TA0A578 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TCRBV5S1A1TA0A578 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TCRBV5S1A1TA0A578 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.12■□□□□ 0.65
TCRBV5S1A1TA0A578 LINC00167-201ENST00000530583 1419 ntBASIC19.12■□□□□ 0.65
TCRBV5S1A1TA0A578 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TCRBV5S1A1TA0A578 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TCRBV5S1A1TA0A578 BX664615.1-201ENST00000443558 458 ntBASIC19.12■□□□□ 0.65
TCRBV5S1A1TA0A578 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.12■□□□□ 0.65
TCRBV5S1A1TA0A578 YBX1P2-201ENST00000489612 999 ntBASIC19.12■□□□□ 0.65
TCRBV5S1A1TA0A578 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.12■□□□□ 0.65
TCRBV5S1A1TA0A578 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.12■□□□□ 0.65
TCRBV5S1A1TA0A578 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.12■□□□□ 0.65
TCRBV5S1A1TA0A578 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.12■□□□□ 0.65
TCRBV5S1A1TA0A578 AC139887.4-201ENST00000607877 719 ntBASIC19.12■□□□□ 0.65
TCRBV5S1A1TA0A578 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.12■□□□□ 0.65
TCRBV5S1A1TA0A578 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.12■□□□□ 0.65
TCRBV5S1A1TA0A578 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TCRBV5S1A1TA0A578 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TCRBV5S1A1TA0A578 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.12■□□□□ 0.65
TCRBV5S1A1TA0A578 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TCRBV5S1A1TA0A578 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TCRBV5S1A1TA0A578 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TCRBV5S1A1TA0A578 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TCRBV5S1A1TA0A578 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TCRBV5S1A1TA0A578 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TCRBV5S1A1TA0A578 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
TCRBV5S1A1TA0A578 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TCRBV5S1A1TA0A578 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
TCRBV5S1A1TA0A578 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TCRBV5S1A1TA0A578 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
TCRBV5S1A1TA0A578 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TCRBV5S1A1TA0A578 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TCRBV5S1A1TA0A578 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TCRBV5S1A1TA0A578 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TCRBV5S1A1TA0A578 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TCRBV5S1A1TA0A578 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TCRBV5S1A1TA0A578 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TCRBV5S1A1TA0A578 LIN28AP1-201ENST00000429574 405 ntBASIC19.11■□□□□ 0.65
TCRBV5S1A1TA0A578 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TCRBV5S1A1TA0A578 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TCRBV5S1A1TA0A578 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.11■□□□□ 0.65
TCRBV5S1A1TA0A578 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TCRBV5S1A1TA0A578 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TCRBV5S1A1TA0A578 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.11■□□□□ 0.65
TCRBV5S1A1TA0A578 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.11■□□□□ 0.65
TCRBV5S1A1TA0A578 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.11■□□□□ 0.65
TCRBV5S1A1TA0A578 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.11■□□□□ 0.65
TCRBV5S1A1TA0A578 AC006011.2-201ENST00000621313 1158 ntBASIC19.11■□□□□ 0.65
TCRBV5S1A1TA0A578 AL031432.5-201ENST00000641059 760 ntBASIC19.11■□□□□ 0.65
TCRBV5S1A1TA0A578 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TCRBV5S1A1TA0A578 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.11■□□□□ 0.65
TCRBV5S1A1TA0A578 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TCRBV5S1A1TA0A578 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms