Protein–RNA interactions for Protein: A0A1B0GVL6

TMEM238L, HCG1800530, isoform CRA_b, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238LA0A1B0GVL6 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
TMEM238LA0A1B0GVL6 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC12.88□□□□□ -0.35
TMEM238LA0A1B0GVL6 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
TMEM238LA0A1B0GVL6 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
TMEM238LA0A1B0GVL6 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC12.88□□□□□ -0.35
TMEM238LA0A1B0GVL6 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TMEM238LA0A1B0GVL6 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TMEM238LA0A1B0GVL6 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TMEM238LA0A1B0GVL6 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TMEM238LA0A1B0GVL6 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TMEM238LA0A1B0GVL6 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TMEM238LA0A1B0GVL6 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TMEM238LA0A1B0GVL6 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TMEM238LA0A1B0GVL6 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TMEM238LA0A1B0GVL6 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC12.87□□□□□ -0.35
TMEM238LA0A1B0GVL6 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC12.87□□□□□ -0.35
TMEM238LA0A1B0GVL6 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC12.87□□□□□ -0.35
TMEM238LA0A1B0GVL6 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
TMEM238LA0A1B0GVL6 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TMEM238LA0A1B0GVL6 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC12.87□□□□□ -0.35
TMEM238LA0A1B0GVL6 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
TMEM238LA0A1B0GVL6 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
TMEM238LA0A1B0GVL6 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TMEM238LA0A1B0GVL6 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TMEM238LA0A1B0GVL6 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
TMEM238LA0A1B0GVL6 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TMEM238LA0A1B0GVL6 CD72-202ENST00000378430 585 ntTSL 3 BASIC12.87□□□□□ -0.35
TMEM238LA0A1B0GVL6 LINC00685-201ENST00000391707 428 ntTSL 5 BASIC12.87□□□□□ -0.35
TMEM238LA0A1B0GVL6 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC12.87□□□□□ -0.35
TMEM238LA0A1B0GVL6 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC12.87□□□□□ -0.35
TMEM238LA0A1B0GVL6 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC12.87□□□□□ -0.35
TMEM238LA0A1B0GVL6 MTDHP2-201ENST00000601468 714 ntBASIC12.87□□□□□ -0.35
TMEM238LA0A1B0GVL6 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC12.87□□□□□ -0.35
TMEM238LA0A1B0GVL6 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TMEM238LA0A1B0GVL6 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
TMEM238LA0A1B0GVL6 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TMEM238LA0A1B0GVL6 AC092171.3-201ENST00000610122 2651 ntBASIC12.87□□□□□ -0.35
TMEM238LA0A1B0GVL6 NF2-208ENST00000403435 2568 ntTSL 5 BASIC12.87□□□□□ -0.35
TMEM238LA0A1B0GVL6 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TMEM238LA0A1B0GVL6 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TMEM238LA0A1B0GVL6 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
TMEM238LA0A1B0GVL6 AC108860.2-201ENST00000562760 2183 ntBASIC12.87□□□□□ -0.35
TMEM238LA0A1B0GVL6 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
TMEM238LA0A1B0GVL6 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TMEM238LA0A1B0GVL6 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TMEM238LA0A1B0GVL6 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TMEM238LA0A1B0GVL6 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
TMEM238LA0A1B0GVL6 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
TMEM238LA0A1B0GVL6 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC12.87□□□□□ -0.35
TMEM238LA0A1B0GVL6 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC12.87□□□□□ -0.35
TMEM238LA0A1B0GVL6 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC12.87□□□□□ -0.35
TMEM238LA0A1B0GVL6 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC12.87□□□□□ -0.35
TMEM238LA0A1B0GVL6 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TMEM238LA0A1B0GVL6 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TMEM238LA0A1B0GVL6 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TMEM238LA0A1B0GVL6 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC12.86□□□□□ -0.35
TMEM238LA0A1B0GVL6 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TMEM238LA0A1B0GVL6 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC12.86□□□□□ -0.35
TMEM238LA0A1B0GVL6 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC12.86□□□□□ -0.35
TMEM238LA0A1B0GVL6 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC12.86□□□□□ -0.35
TMEM238LA0A1B0GVL6 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
TMEM238LA0A1B0GVL6 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
TMEM238LA0A1B0GVL6 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TMEM238LA0A1B0GVL6 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TMEM238LA0A1B0GVL6 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
TMEM238LA0A1B0GVL6 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC12.86□□□□□ -0.35
TMEM238LA0A1B0GVL6 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TMEM238LA0A1B0GVL6 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
TMEM238LA0A1B0GVL6 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TMEM238LA0A1B0GVL6 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC12.86□□□□□ -0.35
TMEM238LA0A1B0GVL6 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TMEM238LA0A1B0GVL6 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TMEM238LA0A1B0GVL6 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TMEM238LA0A1B0GVL6 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TMEM238LA0A1B0GVL6 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TMEM238LA0A1B0GVL6 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TMEM238LA0A1B0GVL6 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
TMEM238LA0A1B0GVL6 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC12.86□□□□□ -0.35
TMEM238LA0A1B0GVL6 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC12.86□□□□□ -0.35
TMEM238LA0A1B0GVL6 SMUG1P1-201ENST00000590640 811 ntBASIC12.86□□□□□ -0.35
TMEM238LA0A1B0GVL6 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC12.86□□□□□ -0.35
TMEM238LA0A1B0GVL6 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TMEM238LA0A1B0GVL6 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC12.86□□□□□ -0.35
TMEM238LA0A1B0GVL6 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TMEM238LA0A1B0GVL6 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
TMEM238LA0A1B0GVL6 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TMEM238LA0A1B0GVL6 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC12.86□□□□□ -0.35
TMEM238LA0A1B0GVL6 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
TMEM238LA0A1B0GVL6 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TMEM238LA0A1B0GVL6 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TMEM238LA0A1B0GVL6 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TMEM238LA0A1B0GVL6 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC12.86□□□□□ -0.35
TMEM238LA0A1B0GVL6 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TMEM238LA0A1B0GVL6 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TMEM238LA0A1B0GVL6 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC12.86□□□□□ -0.35
TMEM238LA0A1B0GVL6 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TMEM238LA0A1B0GVL6 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC12.86□□□□□ -0.35
TMEM238LA0A1B0GVL6 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TMEM238LA0A1B0GVL6 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TMEM238LA0A1B0GVL6 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms