Protein–RNA interactions for Protein: A0A0C4DH25

IGKV3D-20, Immunoglobulin kappa variable 3D-20, humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-20A0A0C4DH25 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
IGKV3D-20A0A0C4DH25 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
IGKV3D-20A0A0C4DH25 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
IGKV3D-20A0A0C4DH25 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
IGKV3D-20A0A0C4DH25 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
IGKV3D-20A0A0C4DH25 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC13.69□□□□□ -0.22
IGKV3D-20A0A0C4DH25 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
IGKV3D-20A0A0C4DH25 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
IGKV3D-20A0A0C4DH25 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
IGKV3D-20A0A0C4DH25 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC13.68□□□□□ -0.22
IGKV3D-20A0A0C4DH25 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
IGKV3D-20A0A0C4DH25 PKD1P5-201ENST00000532415 10291 ntBASIC13.68□□□□□ -0.22
IGKV3D-20A0A0C4DH25 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
IGKV3D-20A0A0C4DH25 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
IGKV3D-20A0A0C4DH25 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
IGKV3D-20A0A0C4DH25 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
IGKV3D-20A0A0C4DH25 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
IGKV3D-20A0A0C4DH25 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
IGKV3D-20A0A0C4DH25 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
IGKV3D-20A0A0C4DH25 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
IGKV3D-20A0A0C4DH25 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
IGKV3D-20A0A0C4DH25 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC13.68□□□□□ -0.22
IGKV3D-20A0A0C4DH25 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC13.68□□□□□ -0.22
IGKV3D-20A0A0C4DH25 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC13.68□□□□□ -0.22
IGKV3D-20A0A0C4DH25 AC142086.2-201ENST00000569753 217 ntBASIC13.68□□□□□ -0.22
IGKV3D-20A0A0C4DH25 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
IGKV3D-20A0A0C4DH25 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC13.68□□□□□ -0.22
IGKV3D-20A0A0C4DH25 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC13.68□□□□□ -0.22
IGKV3D-20A0A0C4DH25 AL445675.2-201ENST00000620291 557 ntBASIC13.68□□□□□ -0.22
IGKV3D-20A0A0C4DH25 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC13.68□□□□□ -0.22
IGKV3D-20A0A0C4DH25 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
IGKV3D-20A0A0C4DH25 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
IGKV3D-20A0A0C4DH25 RCC2P3-201ENST00000418112 1537 ntBASIC13.68□□□□□ -0.22
IGKV3D-20A0A0C4DH25 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
IGKV3D-20A0A0C4DH25 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC13.68□□□□□ -0.22
IGKV3D-20A0A0C4DH25 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
IGKV3D-20A0A0C4DH25 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
IGKV3D-20A0A0C4DH25 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
IGKV3D-20A0A0C4DH25 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC13.68□□□□□ -0.22
IGKV3D-20A0A0C4DH25 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
IGKV3D-20A0A0C4DH25 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
IGKV3D-20A0A0C4DH25 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
IGKV3D-20A0A0C4DH25 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
IGKV3D-20A0A0C4DH25 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC13.68□□□□□ -0.22
IGKV3D-20A0A0C4DH25 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
IGKV3D-20A0A0C4DH25 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
IGKV3D-20A0A0C4DH25 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC13.67□□□□□ -0.22
IGKV3D-20A0A0C4DH25 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
IGKV3D-20A0A0C4DH25 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC13.67□□□□□ -0.22
IGKV3D-20A0A0C4DH25 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
IGKV3D-20A0A0C4DH25 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
IGKV3D-20A0A0C4DH25 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
IGKV3D-20A0A0C4DH25 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
IGKV3D-20A0A0C4DH25 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
IGKV3D-20A0A0C4DH25 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC13.67□□□□□ -0.22
IGKV3D-20A0A0C4DH25 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.67□□□□□ -0.22
IGKV3D-20A0A0C4DH25 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
IGKV3D-20A0A0C4DH25 GNE-204ENST00000539208 2190 ntTSL 2 BASIC13.67□□□□□ -0.22
IGKV3D-20A0A0C4DH25 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
IGKV3D-20A0A0C4DH25 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC13.67□□□□□ -0.22
IGKV3D-20A0A0C4DH25 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC13.67□□□□□ -0.22
IGKV3D-20A0A0C4DH25 DERL1-203ENST00000419562 918 ntTSL 2 BASIC13.67□□□□□ -0.22
IGKV3D-20A0A0C4DH25 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
IGKV3D-20A0A0C4DH25 KRT16P5-201ENST00000455284 522 ntBASIC13.67□□□□□ -0.22
IGKV3D-20A0A0C4DH25 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
IGKV3D-20A0A0C4DH25 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
IGKV3D-20A0A0C4DH25 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC13.67□□□□□ -0.22
IGKV3D-20A0A0C4DH25 AC069544.1-201ENST00000609399 999 ntBASIC13.67□□□□□ -0.22
IGKV3D-20A0A0C4DH25 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC13.67□□□□□ -0.22
IGKV3D-20A0A0C4DH25 AC131212.4-201ENST00000623606 975 ntBASIC13.67□□□□□ -0.22
IGKV3D-20A0A0C4DH25 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC13.67□□□□□ -0.22
IGKV3D-20A0A0C4DH25 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC13.67□□□□□ -0.22
IGKV3D-20A0A0C4DH25 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
IGKV3D-20A0A0C4DH25 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
IGKV3D-20A0A0C4DH25 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
IGKV3D-20A0A0C4DH25 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
IGKV3D-20A0A0C4DH25 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
IGKV3D-20A0A0C4DH25 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
IGKV3D-20A0A0C4DH25 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
IGKV3D-20A0A0C4DH25 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
IGKV3D-20A0A0C4DH25 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
IGKV3D-20A0A0C4DH25 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC13.67□□□□□ -0.22
IGKV3D-20A0A0C4DH25 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
IGKV3D-20A0A0C4DH25 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
IGKV3D-20A0A0C4DH25 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
IGKV3D-20A0A0C4DH25 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
IGKV3D-20A0A0C4DH25 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
IGKV3D-20A0A0C4DH25 HTR7P1-201ENST00000538670 1336 ntBASIC13.66□□□□□ -0.22
IGKV3D-20A0A0C4DH25 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
IGKV3D-20A0A0C4DH25 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC13.66□□□□□ -0.22
IGKV3D-20A0A0C4DH25 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC13.66□□□□□ -0.22
IGKV3D-20A0A0C4DH25 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
IGKV3D-20A0A0C4DH25 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
IGKV3D-20A0A0C4DH25 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC13.66□□□□□ -0.22
IGKV3D-20A0A0C4DH25 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
IGKV3D-20A0A0C4DH25 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
IGKV3D-20A0A0C4DH25 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC13.66□□□□□ -0.22
IGKV3D-20A0A0C4DH25 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
IGKV3D-20A0A0C4DH25 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
IGKV3D-20A0A0C4DH25 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms