Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRGV1A0A0A0MS02 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRGV1A0A0A0MS02 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC13.35□□□□□ -0.27
TRGV1A0A0A0MS02 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRGV1A0A0A0MS02 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRGV1A0A0A0MS02 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
TRGV1A0A0A0MS02 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC13.35□□□□□ -0.27
TRGV1A0A0A0MS02 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRGV1A0A0A0MS02 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRGV1A0A0A0MS02 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC13.35□□□□□ -0.27
TRGV1A0A0A0MS02 TSPY17P-201ENST00000450329 467 ntBASIC13.35□□□□□ -0.27
TRGV1A0A0A0MS02 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
TRGV1A0A0A0MS02 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC13.35□□□□□ -0.27
TRGV1A0A0A0MS02 MIR3180-5-201ENST00000583743 153 ntBASIC13.35□□□□□ -0.27
TRGV1A0A0A0MS02 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRGV1A0A0A0MS02 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRGV1A0A0A0MS02 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TRGV1A0A0A0MS02 AC036111.1-201ENST00000533973 1582 ntBASIC13.35□□□□□ -0.27
TRGV1A0A0A0MS02 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRGV1A0A0A0MS02 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRGV1A0A0A0MS02 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
TRGV1A0A0A0MS02 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRGV1A0A0A0MS02 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TRGV1A0A0A0MS02 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC13.35□□□□□ -0.27
TRGV1A0A0A0MS02 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRGV1A0A0A0MS02 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC13.35□□□□□ -0.27
TRGV1A0A0A0MS02 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TRGV1A0A0A0MS02 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
TRGV1A0A0A0MS02 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRGV1A0A0A0MS02 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRGV1A0A0A0MS02 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRGV1A0A0A0MS02 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRGV1A0A0A0MS02 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRGV1A0A0A0MS02 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRGV1A0A0A0MS02 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRGV1A0A0A0MS02 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRGV1A0A0A0MS02 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRGV1A0A0A0MS02 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRGV1A0A0A0MS02 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRGV1A0A0A0MS02 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRGV1A0A0A0MS02 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRGV1A0A0A0MS02 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRGV1A0A0A0MS02 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRGV1A0A0A0MS02 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRGV1A0A0A0MS02 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRGV1A0A0A0MS02 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC13.34□□□□□ -0.27
TRGV1A0A0A0MS02 KRT8P45-201ENST00000414328 1447 ntBASIC13.34□□□□□ -0.27
TRGV1A0A0A0MS02 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRGV1A0A0A0MS02 MIR564-202ENST00000385049 94 ntBASIC13.34□□□□□ -0.27
TRGV1A0A0A0MS02 ELP6-205ENST00000439305 880 ntTSL 2 BASIC13.34□□□□□ -0.27
TRGV1A0A0A0MS02 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC13.34□□□□□ -0.27
TRGV1A0A0A0MS02 AP003041.3-201ENST00000527151 707 ntBASIC13.34□□□□□ -0.27
TRGV1A0A0A0MS02 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC13.34□□□□□ -0.27
TRGV1A0A0A0MS02 SNX21-213ENST00000614929 587 ntTSL 5 BASIC13.34□□□□□ -0.27
TRGV1A0A0A0MS02 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC13.34□□□□□ -0.27
TRGV1A0A0A0MS02 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRGV1A0A0A0MS02 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRGV1A0A0A0MS02 AC034236.2-201ENST00000606662 1610 ntBASIC13.34□□□□□ -0.27
TRGV1A0A0A0MS02 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRGV1A0A0A0MS02 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC13.34□□□□□ -0.27
TRGV1A0A0A0MS02 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRGV1A0A0A0MS02 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRGV1A0A0A0MS02 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRGV1A0A0A0MS02 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC13.34□□□□□ -0.27
TRGV1A0A0A0MS02 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRGV1A0A0A0MS02 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC13.34□□□□□ -0.27
TRGV1A0A0A0MS02 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC13.34□□□□□ -0.27
TRGV1A0A0A0MS02 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
TRGV1A0A0A0MS02 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
TRGV1A0A0A0MS02 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
TRGV1A0A0A0MS02 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRGV1A0A0A0MS02 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRGV1A0A0A0MS02 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC13.33□□□□□ -0.28
TRGV1A0A0A0MS02 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
TRGV1A0A0A0MS02 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC13.33□□□□□ -0.28
TRGV1A0A0A0MS02 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRGV1A0A0A0MS02 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRGV1A0A0A0MS02 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
TRGV1A0A0A0MS02 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRGV1A0A0A0MS02 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
TRGV1A0A0A0MS02 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRGV1A0A0A0MS02 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC13.33□□□□□ -0.28
TRGV1A0A0A0MS02 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC13.33□□□□□ -0.28
TRGV1A0A0A0MS02 BX088651.1-201ENST00000540551 451 ntBASIC13.33□□□□□ -0.28
TRGV1A0A0A0MS02 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC13.33□□□□□ -0.28
TRGV1A0A0A0MS02 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC13.33□□□□□ -0.28
TRGV1A0A0A0MS02 AL353719.1-201ENST00000566847 864 ntBASIC13.33□□□□□ -0.28
TRGV1A0A0A0MS02 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
TRGV1A0A0A0MS02 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC13.33□□□□□ -0.28
TRGV1A0A0A0MS02 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRGV1A0A0A0MS02 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRGV1A0A0A0MS02 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRGV1A0A0A0MS02 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRGV1A0A0A0MS02 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRGV1A0A0A0MS02 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
TRGV1A0A0A0MS02 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRGV1A0A0A0MS02 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC13.33□□□□□ -0.28
TRGV1A0A0A0MS02 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRGV1A0A0A0MS02 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
TRGV1A0A0A0MS02 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms