Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
IFT52Q9Y366 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.23■□□□□ 0.35
IFT52Q9Y366 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
IFT52Q9Y366 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFT52Q9Y366 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
IFT52Q9Y366 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.23■□□□□ 0.35
IFT52Q9Y366 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFT52Q9Y366 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFT52Q9Y366 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
IFT52Q9Y366 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
IFT52Q9Y366 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFT52Q9Y366 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFT52Q9Y366 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFT52Q9Y366 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
IFT52Q9Y366 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
IFT52Q9Y366 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFT52Q9Y366 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
IFT52Q9Y366 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
IFT52Q9Y366 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
IFT52Q9Y366 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
IFT52Q9Y366 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
IFT52Q9Y366 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
IFT52Q9Y366 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.22■□□□□ 0.35
IFT52Q9Y366 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
IFT52Q9Y366 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
IFT52Q9Y366 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
IFT52Q9Y366 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
IFT52Q9Y366 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.22■□□□□ 0.35
IFT52Q9Y366 ABHD17AP1-201ENST00000358206 933 ntBASIC17.22■□□□□ 0.35
IFT52Q9Y366 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.22■□□□□ 0.35
IFT52Q9Y366 CA15P1-201ENST00000481698 905 ntBASIC17.22■□□□□ 0.35
IFT52Q9Y366 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
IFT52Q9Y366 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.22■□□□□ 0.35
IFT52Q9Y366 SLC25A1P4-201ENST00000567977 778 ntBASIC17.22■□□□□ 0.35
IFT52Q9Y366 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.22■□□□□ 0.35
IFT52Q9Y366 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
IFT52Q9Y366 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
IFT52Q9Y366 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
IFT52Q9Y366 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
IFT52Q9Y366 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
IFT52Q9Y366 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
IFT52Q9Y366 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
IFT52Q9Y366 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
IFT52Q9Y366 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
IFT52Q9Y366 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IFT52Q9Y366 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IFT52Q9Y366 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
IFT52Q9Y366 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.21■□□□□ 0.35
IFT52Q9Y366 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IFT52Q9Y366 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
IFT52Q9Y366 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.21■□□□□ 0.35
IFT52Q9Y366 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
IFT52Q9Y366 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IFT52Q9Y366 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IFT52Q9Y366 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.21■□□□□ 0.35
IFT52Q9Y366 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
IFT52Q9Y366 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IFT52Q9Y366 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
IFT52Q9Y366 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
IFT52Q9Y366 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
IFT52Q9Y366 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IFT52Q9Y366 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
IFT52Q9Y366 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
IFT52Q9Y366 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.21■□□□□ 0.35
IFT52Q9Y366 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.21■□□□□ 0.35
IFT52Q9Y366 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
IFT52Q9Y366 MFAP1P1-201ENST00000442257 1255 ntBASIC17.21■□□□□ 0.35
IFT52Q9Y366 GCSHP5-201ENST00000443090 522 ntBASIC17.21■□□□□ 0.35
IFT52Q9Y366 AL158047.1-201ENST00000445918 881 ntBASIC17.21■□□□□ 0.35
IFT52Q9Y366 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.21■□□□□ 0.35
IFT52Q9Y366 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.21■□□□□ 0.35
IFT52Q9Y366 AC233702.5-201ENST00000584107 538 ntBASIC17.21■□□□□ 0.35
IFT52Q9Y366 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.21■□□□□ 0.35
IFT52Q9Y366 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.21■□□□□ 0.35
IFT52Q9Y366 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IFT52Q9Y366 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IFT52Q9Y366 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IFT52Q9Y366 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.21■□□□□ 0.35
IFT52Q9Y366 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.34
IFT52Q9Y366 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
IFT52Q9Y366 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
IFT52Q9Y366 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
IFT52Q9Y366 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IFT52Q9Y366 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.2■□□□□ 0.34
IFT52Q9Y366 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IFT52Q9Y366 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IFT52Q9Y366 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
IFT52Q9Y366 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
IFT52Q9Y366 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IFT52Q9Y366 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
IFT52Q9Y366 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
IFT52Q9Y366 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.2■□□□□ 0.34
IFT52Q9Y366 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IFT52Q9Y366 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.2■□□□□ 0.34
IFT52Q9Y366 AC098590.1-201ENST00000468126 897 ntBASIC17.2■□□□□ 0.34
IFT52Q9Y366 AC097488.1-201ENST00000507834 756 ntBASIC17.2■□□□□ 0.34
IFT52Q9Y366 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IFT52Q9Y366 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.2■□□□□ 0.34
IFT52Q9Y366 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IFT52Q9Y366 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms