Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
POLR1DQ9Y2S0 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
POLR1DQ9Y2S0 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
POLR1DQ9Y2S0 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
POLR1DQ9Y2S0 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
POLR1DQ9Y2S0 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
POLR1DQ9Y2S0 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
POLR1DQ9Y2S0 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
POLR1DQ9Y2S0 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
POLR1DQ9Y2S0 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
POLR1DQ9Y2S0 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
POLR1DQ9Y2S0 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
POLR1DQ9Y2S0 AC007613.1-201ENST00000572811 2597 ntBASIC16.44■□□□□ 0.22
POLR1DQ9Y2S0 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
POLR1DQ9Y2S0 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.44■□□□□ 0.22
POLR1DQ9Y2S0 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
POLR1DQ9Y2S0 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.44■□□□□ 0.22
POLR1DQ9Y2S0 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
POLR1DQ9Y2S0 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
POLR1DQ9Y2S0 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
POLR1DQ9Y2S0 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.44■□□□□ 0.22
POLR1DQ9Y2S0 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
POLR1DQ9Y2S0 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
POLR1DQ9Y2S0 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
POLR1DQ9Y2S0 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.44■□□□□ 0.22
POLR1DQ9Y2S0 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.44■□□□□ 0.22
POLR1DQ9Y2S0 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.44■□□□□ 0.22
POLR1DQ9Y2S0 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
POLR1DQ9Y2S0 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.44■□□□□ 0.22
POLR1DQ9Y2S0 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.44■□□□□ 0.22
POLR1DQ9Y2S0 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
POLR1DQ9Y2S0 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.44■□□□□ 0.22
POLR1DQ9Y2S0 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
POLR1DQ9Y2S0 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
POLR1DQ9Y2S0 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
POLR1DQ9Y2S0 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
POLR1DQ9Y2S0 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
POLR1DQ9Y2S0 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.44■□□□□ 0.22
POLR1DQ9Y2S0 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.43■□□□□ 0.22
POLR1DQ9Y2S0 AL109659.2-201ENST00000606809 1674 ntBASIC16.43■□□□□ 0.22
POLR1DQ9Y2S0 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
POLR1DQ9Y2S0 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
POLR1DQ9Y2S0 AC008556.1-201ENST00000610908 2040 ntBASIC16.43■□□□□ 0.22
POLR1DQ9Y2S0 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
POLR1DQ9Y2S0 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
POLR1DQ9Y2S0 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
POLR1DQ9Y2S0 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
POLR1DQ9Y2S0 UNC93B2-201ENST00000285383 730 ntBASIC16.43■□□□□ 0.22
POLR1DQ9Y2S0 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.43■□□□□ 0.22
POLR1DQ9Y2S0 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
POLR1DQ9Y2S0 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.43■□□□□ 0.22
POLR1DQ9Y2S0 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.43■□□□□ 0.22
POLR1DQ9Y2S0 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.43■□□□□ 0.22
POLR1DQ9Y2S0 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
POLR1DQ9Y2S0 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.43■□□□□ 0.22
POLR1DQ9Y2S0 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
POLR1DQ9Y2S0 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
POLR1DQ9Y2S0 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
POLR1DQ9Y2S0 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
POLR1DQ9Y2S0 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
POLR1DQ9Y2S0 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
POLR1DQ9Y2S0 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.43■□□□□ 0.22
POLR1DQ9Y2S0 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
POLR1DQ9Y2S0 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
POLR1DQ9Y2S0 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.42■□□□□ 0.22
POLR1DQ9Y2S0 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.42■□□□□ 0.22
POLR1DQ9Y2S0 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.42■□□□□ 0.22
POLR1DQ9Y2S0 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
POLR1DQ9Y2S0 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
POLR1DQ9Y2S0 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.42■□□□□ 0.22
POLR1DQ9Y2S0 PKD1P5-201ENST00000532415 10291 ntBASIC16.42■□□□□ 0.22
POLR1DQ9Y2S0 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.42■□□□□ 0.22
POLR1DQ9Y2S0 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.42■□□□□ 0.22
POLR1DQ9Y2S0 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.42■□□□□ 0.22
POLR1DQ9Y2S0 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
POLR1DQ9Y2S0 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.42■□□□□ 0.22
POLR1DQ9Y2S0 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
POLR1DQ9Y2S0 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
POLR1DQ9Y2S0 AL023284.2-201ENST00000405850 579 ntBASIC16.42■□□□□ 0.22
POLR1DQ9Y2S0 TSPY7P-201ENST00000431358 1114 ntBASIC16.42■□□□□ 0.22
POLR1DQ9Y2S0 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.42■□□□□ 0.22
POLR1DQ9Y2S0 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.42■□□□□ 0.22
POLR1DQ9Y2S0 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.42■□□□□ 0.22
POLR1DQ9Y2S0 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.42■□□□□ 0.22
POLR1DQ9Y2S0 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.42■□□□□ 0.22
POLR1DQ9Y2S0 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.42■□□□□ 0.22
POLR1DQ9Y2S0 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.42■□□□□ 0.22
POLR1DQ9Y2S0 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
POLR1DQ9Y2S0 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.42■□□□□ 0.22
POLR1DQ9Y2S0 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.42■□□□□ 0.22
POLR1DQ9Y2S0 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
POLR1DQ9Y2S0 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
POLR1DQ9Y2S0 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.42■□□□□ 0.22
POLR1DQ9Y2S0 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
POLR1DQ9Y2S0 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
POLR1DQ9Y2S0 AC135050.7-201ENST00000624508 2218 ntBASIC16.42■□□□□ 0.22
POLR1DQ9Y2S0 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
POLR1DQ9Y2S0 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.42■□□□□ 0.22
POLR1DQ9Y2S0 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
POLR1DQ9Y2S0 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms