Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.73■□□□□ 0.59
CHMP2BQ9UQN3 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP2BQ9UQN3 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP2BQ9UQN3 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP2BQ9UQN3 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP2BQ9UQN3 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP2BQ9UQN3 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.72■□□□□ 0.59
CHMP2BQ9UQN3 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP2BQ9UQN3 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP2BQ9UQN3 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
CHMP2BQ9UQN3 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP2BQ9UQN3 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CHMP2BQ9UQN3 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CHMP2BQ9UQN3 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP2BQ9UQN3 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.72■□□□□ 0.59
CHMP2BQ9UQN3 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP2BQ9UQN3 MCCD1P1-208ENST00000445732 328 ntBASIC18.72■□□□□ 0.59
CHMP2BQ9UQN3 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.72■□□□□ 0.59
CHMP2BQ9UQN3 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.72■□□□□ 0.59
CHMP2BQ9UQN3 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.72■□□□□ 0.59
CHMP2BQ9UQN3 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP2BQ9UQN3 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.72■□□□□ 0.59
CHMP2BQ9UQN3 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.72■□□□□ 0.59
CHMP2BQ9UQN3 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP2BQ9UQN3 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP2BQ9UQN3 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP2BQ9UQN3 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP2BQ9UQN3 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP2BQ9UQN3 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.72■□□□□ 0.59
CHMP2BQ9UQN3 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CHMP2BQ9UQN3 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP2BQ9UQN3 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP2BQ9UQN3 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP2BQ9UQN3 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP2BQ9UQN3 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP2BQ9UQN3 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.72■□□□□ 0.59
CHMP2BQ9UQN3 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP2BQ9UQN3 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP2BQ9UQN3 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP2BQ9UQN3 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CHMP2BQ9UQN3 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP2BQ9UQN3 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CHMP2BQ9UQN3 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.59
CHMP2BQ9UQN3 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CHMP2BQ9UQN3 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CHMP2BQ9UQN3 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.71■□□□□ 0.59
CHMP2BQ9UQN3 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
CHMP2BQ9UQN3 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CHMP2BQ9UQN3 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP2BQ9UQN3 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP2BQ9UQN3 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP2BQ9UQN3 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP2BQ9UQN3 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP2BQ9UQN3 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.71■□□□□ 0.59
CHMP2BQ9UQN3 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.71■□□□□ 0.59
CHMP2BQ9UQN3 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.71■□□□□ 0.59
CHMP2BQ9UQN3 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CHMP2BQ9UQN3 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.71■□□□□ 0.59
CHMP2BQ9UQN3 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP2BQ9UQN3 MIR564-202ENST00000385049 94 ntBASIC18.71■□□□□ 0.59
CHMP2BQ9UQN3 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.71■□□□□ 0.59
CHMP2BQ9UQN3 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP2BQ9UQN3 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.71■□□□□ 0.59
CHMP2BQ9UQN3 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
CHMP2BQ9UQN3 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP2BQ9UQN3 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.71■□□□□ 0.59
CHMP2BQ9UQN3 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP2BQ9UQN3 GNAS-203ENST00000306120 1878 ntBASIC18.71■□□□□ 0.59
CHMP2BQ9UQN3 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP2BQ9UQN3 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.71■□□□□ 0.58
CHMP2BQ9UQN3 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP2BQ9UQN3 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP2BQ9UQN3 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.7■□□□□ 0.58
CHMP2BQ9UQN3 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP2BQ9UQN3 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP2BQ9UQN3 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP2BQ9UQN3 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP2BQ9UQN3 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP2BQ9UQN3 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP2BQ9UQN3 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CHMP2BQ9UQN3 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CHMP2BQ9UQN3 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.7■□□□□ 0.58
CHMP2BQ9UQN3 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.7■□□□□ 0.58
CHMP2BQ9UQN3 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.7■□□□□ 0.58
CHMP2BQ9UQN3 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.7■□□□□ 0.58
CHMP2BQ9UQN3 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.7■□□□□ 0.58
CHMP2BQ9UQN3 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.7■□□□□ 0.58
CHMP2BQ9UQN3 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
CHMP2BQ9UQN3 CD177P1-201ENST00000606252 935 ntBASIC18.7■□□□□ 0.58
CHMP2BQ9UQN3 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP2BQ9UQN3 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
CHMP2BQ9UQN3 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CHMP2BQ9UQN3 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.7■□□□□ 0.58
CHMP2BQ9UQN3 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CHMP2BQ9UQN3 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP2BQ9UQN3 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP2BQ9UQN3 AC096733.2-201ENST00000609937 1394 ntBASIC18.69■□□□□ 0.58
CHMP2BQ9UQN3 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP2BQ9UQN3 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP2BQ9UQN3 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms