Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
PCDHGB4Q9UN71 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGB4Q9UN71 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGB4Q9UN71 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGB4Q9UN71 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGB4Q9UN71 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGB4Q9UN71 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.84■□□□□ 0.45
PCDHGB4Q9UN71 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGB4Q9UN71 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGB4Q9UN71 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGB4Q9UN71 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHGB4Q9UN71 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHGB4Q9UN71 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHGB4Q9UN71 Z85996.1-201ENST00000494644 937 ntBASIC17.84■□□□□ 0.45
PCDHGB4Q9UN71 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGB4Q9UN71 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHGB4Q9UN71 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PCDHGB4Q9UN71 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.84■□□□□ 0.45
PCDHGB4Q9UN71 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.84■□□□□ 0.45
PCDHGB4Q9UN71 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.84■□□□□ 0.45
PCDHGB4Q9UN71 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHGB4Q9UN71 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHGB4Q9UN71 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGB4Q9UN71 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
PCDHGB4Q9UN71 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.84■□□□□ 0.45
PCDHGB4Q9UN71 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGB4Q9UN71 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHGB4Q9UN71 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGB4Q9UN71 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGB4Q9UN71 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGB4Q9UN71 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGB4Q9UN71 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
PCDHGB4Q9UN71 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.83■□□□□ 0.45
PCDHGB4Q9UN71 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHGB4Q9UN71 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHGB4Q9UN71 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHGB4Q9UN71 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHGB4Q9UN71 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHGB4Q9UN71 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
PCDHGB4Q9UN71 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHGB4Q9UN71 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHGB4Q9UN71 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHGB4Q9UN71 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHGB4Q9UN71 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHGB4Q9UN71 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGB4Q9UN71 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGB4Q9UN71 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGB4Q9UN71 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGB4Q9UN71 NIFKP9-201ENST00000419265 221 ntBASIC17.83■□□□□ 0.44
PCDHGB4Q9UN71 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.83■□□□□ 0.44
PCDHGB4Q9UN71 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.83■□□□□ 0.44
PCDHGB4Q9UN71 PRSS44-201ENST00000515154 1146 ntBASIC17.83■□□□□ 0.44
PCDHGB4Q9UN71 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.83■□□□□ 0.44
PCDHGB4Q9UN71 AC006058.3-201ENST00000606217 1069 ntBASIC17.83■□□□□ 0.44
PCDHGB4Q9UN71 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGB4Q9UN71 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGB4Q9UN71 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGB4Q9UN71 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGB4Q9UN71 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGB4Q9UN71 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.83■□□□□ 0.44
PCDHGB4Q9UN71 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGB4Q9UN71 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.83■□□□□ 0.44
PCDHGB4Q9UN71 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGB4Q9UN71 RCC2P6-201ENST00000526625 1557 ntBASIC17.83■□□□□ 0.44
PCDHGB4Q9UN71 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGB4Q9UN71 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGB4Q9UN71 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGB4Q9UN71 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGB4Q9UN71 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGB4Q9UN71 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGB4Q9UN71 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGB4Q9UN71 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
PCDHGB4Q9UN71 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGB4Q9UN71 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGB4Q9UN71 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGB4Q9UN71 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGB4Q9UN71 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGB4Q9UN71 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.82■□□□□ 0.44
PCDHGB4Q9UN71 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.82■□□□□ 0.44
PCDHGB4Q9UN71 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGB4Q9UN71 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHGB4Q9UN71 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGB4Q9UN71 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGB4Q9UN71 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGB4Q9UN71 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.82■□□□□ 0.44
PCDHGB4Q9UN71 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.82■□□□□ 0.44
PCDHGB4Q9UN71 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHGB4Q9UN71 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.82■□□□□ 0.44
PCDHGB4Q9UN71 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHGB4Q9UN71 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PCDHGB4Q9UN71 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
PCDHGB4Q9UN71 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGB4Q9UN71 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGB4Q9UN71 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGB4Q9UN71 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
PCDHGB4Q9UN71 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGB4Q9UN71 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGB4Q9UN71 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGB4Q9UN71 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHGB4Q9UN71 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms