Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CCNL1Q9UK58 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
CCNL1Q9UK58 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC23.31■■□□□ 1.32
CCNL1Q9UK58 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC23.3■■□□□ 1.32
CCNL1Q9UK58 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CCNL1Q9UK58 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
CCNL1Q9UK58 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC23.3■■□□□ 1.32
CCNL1Q9UK58 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CCNL1Q9UK58 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC23.3■■□□□ 1.32
CCNL1Q9UK58 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC23.3■■□□□ 1.32
CCNL1Q9UK58 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC23.3■■□□□ 1.32
CCNL1Q9UK58 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
CCNL1Q9UK58 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CCNL1Q9UK58 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
CCNL1Q9UK58 AC125437.2-201ENST00000625180 2167 ntBASIC23.3■■□□□ 1.32
CCNL1Q9UK58 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CCNL1Q9UK58 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CCNL1Q9UK58 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.29■■□□□ 1.32
CCNL1Q9UK58 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCNL1Q9UK58 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCNL1Q9UK58 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCNL1Q9UK58 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCNL1Q9UK58 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CCNL1Q9UK58 CRCP-205ENST00000431089 942 ntTSL 2 BASIC23.29■■□□□ 1.32
CCNL1Q9UK58 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CCNL1Q9UK58 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC23.29■■□□□ 1.32
CCNL1Q9UK58 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC23.29■■□□□ 1.32
CCNL1Q9UK58 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCNL1Q9UK58 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC23.29■■□□□ 1.32
CCNL1Q9UK58 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC23.29■■□□□ 1.32
CCNL1Q9UK58 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC23.29■■□□□ 1.32
CCNL1Q9UK58 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC23.29■■□□□ 1.32
CCNL1Q9UK58 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCNL1Q9UK58 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCNL1Q9UK58 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC23.29■■□□□ 1.32
CCNL1Q9UK58 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
CCNL1Q9UK58 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CCNL1Q9UK58 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC23.28■■□□□ 1.32
CCNL1Q9UK58 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCNL1Q9UK58 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC23.28■■□□□ 1.32
CCNL1Q9UK58 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCNL1Q9UK58 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC23.28■■□□□ 1.32
CCNL1Q9UK58 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCNL1Q9UK58 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC23.28■■□□□ 1.32
CCNL1Q9UK58 AC211486.1-202ENST00000416371 468 ntBASIC23.28■■□□□ 1.32
CCNL1Q9UK58 AC009947.1-201ENST00000444350 727 ntBASIC23.28■■□□□ 1.32
CCNL1Q9UK58 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC23.28■■□□□ 1.32
CCNL1Q9UK58 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC23.28■■□□□ 1.32
CCNL1Q9UK58 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC23.28■■□□□ 1.32
CCNL1Q9UK58 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC23.28■■□□□ 1.32
CCNL1Q9UK58 AC211476.1-201ENST00000503899 468 ntBASIC23.28■■□□□ 1.32
CCNL1Q9UK58 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC23.28■■□□□ 1.32
CCNL1Q9UK58 RPS29-206ENST00000557111 488 ntTSL 2 BASIC23.28■■□□□ 1.32
CCNL1Q9UK58 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCNL1Q9UK58 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC23.28■■□□□ 1.32
CCNL1Q9UK58 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC23.28■■□□□ 1.32
CCNL1Q9UK58 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CCNL1Q9UK58 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCNL1Q9UK58 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC23.28■■□□□ 1.32
CCNL1Q9UK58 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCNL1Q9UK58 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCNL1Q9UK58 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CCNL1Q9UK58 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCNL1Q9UK58 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC23.28■■□□□ 1.32
CCNL1Q9UK58 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC23.28■■□□□ 1.32
CCNL1Q9UK58 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC23.28■■□□□ 1.32
CCNL1Q9UK58 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCNL1Q9UK58 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
CCNL1Q9UK58 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCNL1Q9UK58 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCNL1Q9UK58 AL157384.1-201ENST00000445995 2473 ntBASIC23.27■■□□□ 1.32
CCNL1Q9UK58 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCNL1Q9UK58 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCNL1Q9UK58 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC23.27■■□□□ 1.32
CCNL1Q9UK58 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
CCNL1Q9UK58 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CCNL1Q9UK58 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCNL1Q9UK58 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
CCNL1Q9UK58 BEX3-201ENST00000361298 921 ntTSL 2 BASIC23.27■■□□□ 1.32
CCNL1Q9UK58 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCNL1Q9UK58 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC23.27■■□□□ 1.32
CCNL1Q9UK58 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CCNL1Q9UK58 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC23.27■■□□□ 1.32
CCNL1Q9UK58 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC23.27■■□□□ 1.32
CCNL1Q9UK58 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC23.27■■□□□ 1.32
CCNL1Q9UK58 RNF151-202ENST00000569210 853 ntTSL 2 BASIC23.27■■□□□ 1.32
CCNL1Q9UK58 MTDHP5-201ENST00000598980 586 ntBASIC23.27■■□□□ 1.32
CCNL1Q9UK58 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC23.27■■□□□ 1.32
CCNL1Q9UK58 AL024508.2-201ENST00000607749 1894 ntBASIC23.27■■□□□ 1.32
CCNL1Q9UK58 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
CCNL1Q9UK58 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCNL1Q9UK58 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC23.27■■□□□ 1.32
CCNL1Q9UK58 KRT18P28-201ENST00000453838 1332 ntBASIC23.27■■□□□ 1.32
CCNL1Q9UK58 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCNL1Q9UK58 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC23.27■■□□□ 1.32
CCNL1Q9UK58 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CCNL1Q9UK58 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CCNL1Q9UK58 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CCNL1Q9UK58 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CCNL1Q9UK58 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms