Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21■□□□□ 0.95
HOXC10Q9NYD6 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
HOXC10Q9NYD6 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HOXC10Q9NYD6 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HOXC10Q9NYD6 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HOXC10Q9NYD6 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC21■□□□□ 0.95
HOXC10Q9NYD6 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HOXC10Q9NYD6 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC21■□□□□ 0.95
HOXC10Q9NYD6 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC21■□□□□ 0.95
HOXC10Q9NYD6 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HOXC10Q9NYD6 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
HOXC10Q9NYD6 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HOXC10Q9NYD6 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HOXC10Q9NYD6 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HOXC10Q9NYD6 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.99■□□□□ 0.95
HOXC10Q9NYD6 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HOXC10Q9NYD6 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HOXC10Q9NYD6 RCN1P2-201ENST00000398357 915 ntBASIC20.99■□□□□ 0.95
HOXC10Q9NYD6 AL590627.1-203ENST00000421194 1026 ntBASIC20.99■□□□□ 0.95
HOXC10Q9NYD6 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.99■□□□□ 0.95
HOXC10Q9NYD6 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.99■□□□□ 0.95
HOXC10Q9NYD6 AP001005.1-201ENST00000571755 1248 ntBASIC20.99■□□□□ 0.95
HOXC10Q9NYD6 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.99■□□□□ 0.95
HOXC10Q9NYD6 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
HOXC10Q9NYD6 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HOXC10Q9NYD6 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.99■□□□□ 0.95
HOXC10Q9NYD6 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.99■□□□□ 0.95
HOXC10Q9NYD6 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HOXC10Q9NYD6 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HOXC10Q9NYD6 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HOXC10Q9NYD6 TP73-AS1-210ENST00000637775 1455 ntBASIC20.99■□□□□ 0.95
HOXC10Q9NYD6 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HOXC10Q9NYD6 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.99■□□□□ 0.95
HOXC10Q9NYD6 AC099343.3-201ENST00000605834 2503 ntBASIC20.99■□□□□ 0.95
HOXC10Q9NYD6 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HOXC10Q9NYD6 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HOXC10Q9NYD6 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HOXC10Q9NYD6 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HOXC10Q9NYD6 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.98■□□□□ 0.95
HOXC10Q9NYD6 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
HOXC10Q9NYD6 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.98■□□□□ 0.95
HOXC10Q9NYD6 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
HOXC10Q9NYD6 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HOXC10Q9NYD6 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
HOXC10Q9NYD6 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HOXC10Q9NYD6 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.98■□□□□ 0.95
HOXC10Q9NYD6 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
HOXC10Q9NYD6 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.98■□□□□ 0.95
HOXC10Q9NYD6 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
HOXC10Q9NYD6 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
HOXC10Q9NYD6 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.98■□□□□ 0.95
HOXC10Q9NYD6 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HOXC10Q9NYD6 AC009533.2-201ENST00000543664 586 ntBASIC20.98■□□□□ 0.95
HOXC10Q9NYD6 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.98■□□□□ 0.95
HOXC10Q9NYD6 AC005336.2-201ENST00000593183 939 ntBASIC20.98■□□□□ 0.95
HOXC10Q9NYD6 AL773604.1-201ENST00000617417 272 ntBASIC20.98■□□□□ 0.95
HOXC10Q9NYD6 TP73-AS1-207ENST00000624167 988 ntBASIC20.98■□□□□ 0.95
HOXC10Q9NYD6 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
HOXC10Q9NYD6 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HOXC10Q9NYD6 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HOXC10Q9NYD6 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
HOXC10Q9NYD6 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HOXC10Q9NYD6 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HOXC10Q9NYD6 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.97■□□□□ 0.95
HOXC10Q9NYD6 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HOXC10Q9NYD6 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HOXC10Q9NYD6 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HOXC10Q9NYD6 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
HOXC10Q9NYD6 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.97■□□□□ 0.95
HOXC10Q9NYD6 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HOXC10Q9NYD6 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC20.97■□□□□ 0.95
HOXC10Q9NYD6 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
HOXC10Q9NYD6 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.97■□□□□ 0.95
HOXC10Q9NYD6 MTCL1P1-201ENST00000446207 792 ntBASIC20.97■□□□□ 0.95
HOXC10Q9NYD6 RNA5SP419-201ENST00000515908 135 ntBASIC20.97■□□□□ 0.95
HOXC10Q9NYD6 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
HOXC10Q9NYD6 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.97■□□□□ 0.95
HOXC10Q9NYD6 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HOXC10Q9NYD6 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.97■□□□□ 0.95
HOXC10Q9NYD6 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
HOXC10Q9NYD6 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.97■□□□□ 0.95
HOXC10Q9NYD6 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
HOXC10Q9NYD6 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
HOXC10Q9NYD6 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HOXC10Q9NYD6 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HOXC10Q9NYD6 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HOXC10Q9NYD6 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.96■□□□□ 0.95
HOXC10Q9NYD6 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HOXC10Q9NYD6 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HOXC10Q9NYD6 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HOXC10Q9NYD6 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HOXC10Q9NYD6 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HOXC10Q9NYD6 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
HOXC10Q9NYD6 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.96■□□□□ 0.95
HOXC10Q9NYD6 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HOXC10Q9NYD6 KRT18P67-201ENST00000432816 1264 ntBASIC20.96■□□□□ 0.95
HOXC10Q9NYD6 AF186996.4-201ENST00000467186 377 ntBASIC20.96■□□□□ 0.95
HOXC10Q9NYD6 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.96■□□□□ 0.95
HOXC10Q9NYD6 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.96■□□□□ 0.95
HOXC10Q9NYD6 AC120114.3-201ENST00000611923 658 ntBASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms