Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SLC52A1Q9NWF4 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SLC52A1Q9NWF4 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SLC52A1Q9NWF4 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SLC52A1Q9NWF4 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC26.23■■□□□ 1.79
SLC52A1Q9NWF4 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SLC52A1Q9NWF4 UPF3AP3-201ENST00000420996 769 ntBASIC26.23■■□□□ 1.79
SLC52A1Q9NWF4 MED15P5-201ENST00000423150 992 ntBASIC26.23■■□□□ 1.79
SLC52A1Q9NWF4 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC26.23■■□□□ 1.79
SLC52A1Q9NWF4 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC26.23■■□□□ 1.79
SLC52A1Q9NWF4 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC26.23■■□□□ 1.79
SLC52A1Q9NWF4 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC26.23■■□□□ 1.79
SLC52A1Q9NWF4 AC008735.5-201ENST00000623544 497 ntBASIC26.23■■□□□ 1.79
SLC52A1Q9NWF4 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC26.23■■□□□ 1.79
SLC52A1Q9NWF4 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC26.23■■□□□ 1.79
SLC52A1Q9NWF4 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
SLC52A1Q9NWF4 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
SLC52A1Q9NWF4 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SLC52A1Q9NWF4 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SLC52A1Q9NWF4 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC26.22■■□□□ 1.79
SLC52A1Q9NWF4 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SLC52A1Q9NWF4 SOD2-201ENST00000337404 991 ntTSL 2 BASIC26.22■■□□□ 1.79
SLC52A1Q9NWF4 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SLC52A1Q9NWF4 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
SLC52A1Q9NWF4 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC26.22■■□□□ 1.79
SLC52A1Q9NWF4 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC26.22■■□□□ 1.79
SLC52A1Q9NWF4 LINC00602-201ENST00000629776 2065 ntBASIC26.22■■□□□ 1.79
SLC52A1Q9NWF4 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SLC52A1Q9NWF4 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
SLC52A1Q9NWF4 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
SLC52A1Q9NWF4 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC26.22■■□□□ 1.79
SLC52A1Q9NWF4 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SLC52A1Q9NWF4 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
SLC52A1Q9NWF4 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SLC52A1Q9NWF4 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
SLC52A1Q9NWF4 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SLC52A1Q9NWF4 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC26.21■■□□□ 1.79
SLC52A1Q9NWF4 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC26.21■■□□□ 1.79
SLC52A1Q9NWF4 AC092910.1-201ENST00000482027 1129 ntBASIC26.21■■□□□ 1.79
SLC52A1Q9NWF4 RNA5SP415-201ENST00000517246 115 ntBASIC26.21■■□□□ 1.79
SLC52A1Q9NWF4 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC26.21■■□□□ 1.79
SLC52A1Q9NWF4 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
SLC52A1Q9NWF4 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
SLC52A1Q9NWF4 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC26.21■■□□□ 1.79
SLC52A1Q9NWF4 EFS-203ENST00000429593 2610 ntTSL 2 BASIC26.21■■□□□ 1.79
SLC52A1Q9NWF4 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SLC52A1Q9NWF4 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC26.21■■□□□ 1.79
SLC52A1Q9NWF4 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC26.21■■□□□ 1.79
SLC52A1Q9NWF4 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SLC52A1Q9NWF4 SNAI3-AS1-205ENST00000568633 2096 ntBASIC26.21■■□□□ 1.79
SLC52A1Q9NWF4 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
SLC52A1Q9NWF4 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC26.2■■□□□ 1.79
SLC52A1Q9NWF4 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
SLC52A1Q9NWF4 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.79
SLC52A1Q9NWF4 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
SLC52A1Q9NWF4 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
SLC52A1Q9NWF4 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC26.2■■□□□ 1.78
SLC52A1Q9NWF4 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC26.2■■□□□ 1.78
SLC52A1Q9NWF4 AL691403.2-201ENST00000618460 490 ntBASIC26.2■■□□□ 1.78
SLC52A1Q9NWF4 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
SLC52A1Q9NWF4 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC26.2■■□□□ 1.78
SLC52A1Q9NWF4 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
SLC52A1Q9NWF4 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SLC52A1Q9NWF4 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SLC52A1Q9NWF4 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
SLC52A1Q9NWF4 AC093484.2-201ENST00000580996 2166 ntBASIC26.19■■□□□ 1.78
SLC52A1Q9NWF4 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC26.19■■□□□ 1.78
SLC52A1Q9NWF4 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
SLC52A1Q9NWF4 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SLC52A1Q9NWF4 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC26.19■■□□□ 1.78
SLC52A1Q9NWF4 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC26.19■■□□□ 1.78
SLC52A1Q9NWF4 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
SLC52A1Q9NWF4 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
SLC52A1Q9NWF4 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
SLC52A1Q9NWF4 BID-204ENST00000399767 2129 ntTSL 2 BASIC26.19■■□□□ 1.78
SLC52A1Q9NWF4 RPSAP43-201ENST00000402237 625 ntBASIC26.19■■□□□ 1.78
SLC52A1Q9NWF4 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
SLC52A1Q9NWF4 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC26.19■■□□□ 1.78
SLC52A1Q9NWF4 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC26.19■■□□□ 1.78
SLC52A1Q9NWF4 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC26.19■■□□□ 1.78
SLC52A1Q9NWF4 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC26.19■■□□□ 1.78
SLC52A1Q9NWF4 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC26.19■■□□□ 1.78
SLC52A1Q9NWF4 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
SLC52A1Q9NWF4 AC107918.4-202ENST00000641623 219 ntBASIC26.19■■□□□ 1.78
SLC52A1Q9NWF4 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SLC52A1Q9NWF4 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC26.19■■□□□ 1.78
SLC52A1Q9NWF4 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC26.19■■□□□ 1.78
SLC52A1Q9NWF4 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
SLC52A1Q9NWF4 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SLC52A1Q9NWF4 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SLC52A1Q9NWF4 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
SLC52A1Q9NWF4 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC26.18■■□□□ 1.78
SLC52A1Q9NWF4 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC26.18■■□□□ 1.78
SLC52A1Q9NWF4 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC26.18■■□□□ 1.78
SLC52A1Q9NWF4 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
SLC52A1Q9NWF4 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SLC52A1Q9NWF4 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC26.18■■□□□ 1.78
SLC52A1Q9NWF4 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
SLC52A1Q9NWF4 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC26.18■■□□□ 1.78
SLC52A1Q9NWF4 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC26.18■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms