Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
RTN4Q9NQC3 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.68■■□□□ 1.06
RTN4Q9NQC3 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.68■■□□□ 1.06
RTN4Q9NQC3 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RTN4Q9NQC3 KRT18P68-201ENST00000392293 1000 ntBASIC21.68■■□□□ 1.06
RTN4Q9NQC3 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.68■■□□□ 1.06
RTN4Q9NQC3 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC21.68■■□□□ 1.06
RTN4Q9NQC3 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RTN4Q9NQC3 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RTN4Q9NQC3 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC21.68■■□□□ 1.06
RTN4Q9NQC3 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RTN4Q9NQC3 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RTN4Q9NQC3 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
RTN4Q9NQC3 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RTN4Q9NQC3 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RTN4Q9NQC3 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RTN4Q9NQC3 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC21.68■■□□□ 1.06
RTN4Q9NQC3 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC21.68■■□□□ 1.06
RTN4Q9NQC3 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC21.68■■□□□ 1.06
RTN4Q9NQC3 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
RTN4Q9NQC3 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
RTN4Q9NQC3 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RTN4Q9NQC3 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC21.68■■□□□ 1.06
RTN4Q9NQC3 DOC2GP-204ENST00000639052 2548 ntBASIC21.68■■□□□ 1.06
RTN4Q9NQC3 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RTN4Q9NQC3 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RTN4Q9NQC3 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RTN4Q9NQC3 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
RTN4Q9NQC3 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
RTN4Q9NQC3 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RTN4Q9NQC3 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
RTN4Q9NQC3 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RTN4Q9NQC3 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RTN4Q9NQC3 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC21.67■■□□□ 1.06
RTN4Q9NQC3 AC243964.3-201ENST00000623022 2028 ntBASIC21.67■■□□□ 1.06
RTN4Q9NQC3 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RTN4Q9NQC3 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RTN4Q9NQC3 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RTN4Q9NQC3 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC21.67■■□□□ 1.06
RTN4Q9NQC3 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RTN4Q9NQC3 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RTN4Q9NQC3 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RTN4Q9NQC3 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RTN4Q9NQC3 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RTN4Q9NQC3 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.67■■□□□ 1.06
RTN4Q9NQC3 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.67■■□□□ 1.06
RTN4Q9NQC3 DUX4L16-201ENST00000555130 1264 ntBASIC21.67■■□□□ 1.06
RTN4Q9NQC3 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
RTN4Q9NQC3 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.67■■□□□ 1.06
RTN4Q9NQC3 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RTN4Q9NQC3 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
RTN4Q9NQC3 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RTN4Q9NQC3 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC21.67■■□□□ 1.06
RTN4Q9NQC3 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RTN4Q9NQC3 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RTN4Q9NQC3 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
RTN4Q9NQC3 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RTN4Q9NQC3 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
RTN4Q9NQC3 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC21.66■■□□□ 1.06
RTN4Q9NQC3 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.66■■□□□ 1.06
RTN4Q9NQC3 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.66■■□□□ 1.06
RTN4Q9NQC3 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RTN4Q9NQC3 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RTN4Q9NQC3 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RTN4Q9NQC3 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RTN4Q9NQC3 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.66■■□□□ 1.06
RTN4Q9NQC3 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.66■■□□□ 1.06
RTN4Q9NQC3 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.66■■□□□ 1.06
RTN4Q9NQC3 ACTG1P22-201ENST00000603793 1099 ntBASIC21.66■■□□□ 1.06
RTN4Q9NQC3 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.66■■□□□ 1.06
RTN4Q9NQC3 DNAJC24-202ENST00000465995 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RTN4Q9NQC3 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
RTN4Q9NQC3 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RTN4Q9NQC3 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RTN4Q9NQC3 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.66■■□□□ 1.06
RTN4Q9NQC3 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RTN4Q9NQC3 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RTN4Q9NQC3 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RTN4Q9NQC3 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
RTN4Q9NQC3 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC21.66■■□□□ 1.06
RTN4Q9NQC3 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.66■■□□□ 1.06
RTN4Q9NQC3 AC093525.10-201ENST00000625130 1569 ntBASIC21.65■■□□□ 1.06
RTN4Q9NQC3 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTN4Q9NQC3 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTN4Q9NQC3 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTN4Q9NQC3 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTN4Q9NQC3 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
RTN4Q9NQC3 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.65■■□□□ 1.06
RTN4Q9NQC3 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTN4Q9NQC3 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC21.65■■□□□ 1.06
RTN4Q9NQC3 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTN4Q9NQC3 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTN4Q9NQC3 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC21.65■■□□□ 1.06
RTN4Q9NQC3 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
RTN4Q9NQC3 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTN4Q9NQC3 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.65■■□□□ 1.06
RTN4Q9NQC3 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.65■■□□□ 1.06
RTN4Q9NQC3 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTN4Q9NQC3 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RTN4Q9NQC3 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms