Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH20Q9HBT6 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH20Q9HBT6 AC073508.3-201ENST00000619697 1419 ntBASIC16.09■□□□□ 0.17
CDH20Q9HBT6 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH20Q9HBT6 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CDH20Q9HBT6 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH20Q9HBT6 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH20Q9HBT6 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CDH20Q9HBT6 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.08■□□□□ 0.17
CDH20Q9HBT6 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
CDH20Q9HBT6 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
CDH20Q9HBT6 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CDH20Q9HBT6 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CDH20Q9HBT6 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
CDH20Q9HBT6 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CDH20Q9HBT6 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDH20Q9HBT6 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDH20Q9HBT6 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.08■□□□□ 0.16
CDH20Q9HBT6 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDH20Q9HBT6 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDH20Q9HBT6 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
CDH20Q9HBT6 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CDH20Q9HBT6 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDH20Q9HBT6 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
CDH20Q9HBT6 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CDH20Q9HBT6 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.08■□□□□ 0.16
CDH20Q9HBT6 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.08■□□□□ 0.16
CDH20Q9HBT6 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CDH20Q9HBT6 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.08■□□□□ 0.16
CDH20Q9HBT6 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.08■□□□□ 0.16
CDH20Q9HBT6 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CDH20Q9HBT6 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.08■□□□□ 0.16
CDH20Q9HBT6 AC139887.4-201ENST00000607877 719 ntBASIC16.08■□□□□ 0.16
CDH20Q9HBT6 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDH20Q9HBT6 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDH20Q9HBT6 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.08■□□□□ 0.16
CDH20Q9HBT6 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CDH20Q9HBT6 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDH20Q9HBT6 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDH20Q9HBT6 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDH20Q9HBT6 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.08■□□□□ 0.16
CDH20Q9HBT6 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CDH20Q9HBT6 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.08■□□□□ 0.16
CDH20Q9HBT6 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.08■□□□□ 0.16
CDH20Q9HBT6 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDH20Q9HBT6 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDH20Q9HBT6 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDH20Q9HBT6 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDH20Q9HBT6 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDH20Q9HBT6 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.07■□□□□ 0.16
CDH20Q9HBT6 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CDH20Q9HBT6 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDH20Q9HBT6 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDH20Q9HBT6 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDH20Q9HBT6 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDH20Q9HBT6 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CDH20Q9HBT6 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
CDH20Q9HBT6 AK4P3-201ENST00000418260 669 ntBASIC16.07■□□□□ 0.16
CDH20Q9HBT6 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CDH20Q9HBT6 KRT18P41-201ENST00000518924 1277 ntBASIC16.07■□□□□ 0.16
CDH20Q9HBT6 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.07■□□□□ 0.16
CDH20Q9HBT6 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDH20Q9HBT6 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDH20Q9HBT6 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CDH20Q9HBT6 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.07■□□□□ 0.16
CDH20Q9HBT6 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.07■□□□□ 0.16
CDH20Q9HBT6 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDH20Q9HBT6 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDH20Q9HBT6 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDH20Q9HBT6 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.07■□□□□ 0.16
CDH20Q9HBT6 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CDH20Q9HBT6 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDH20Q9HBT6 AC093503.3-201ENST00000624917 2352 ntBASIC16.07■□□□□ 0.16
CDH20Q9HBT6 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDH20Q9HBT6 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDH20Q9HBT6 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CDH20Q9HBT6 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH20Q9HBT6 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH20Q9HBT6 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH20Q9HBT6 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH20Q9HBT6 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH20Q9HBT6 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDH20Q9HBT6 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH20Q9HBT6 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CDH20Q9HBT6 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH20Q9HBT6 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH20Q9HBT6 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDH20Q9HBT6 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.06■□□□□ 0.16
CDH20Q9HBT6 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.06■□□□□ 0.16
CDH20Q9HBT6 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.06■□□□□ 0.16
CDH20Q9HBT6 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.06■□□□□ 0.16
CDH20Q9HBT6 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
CDH20Q9HBT6 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDH20Q9HBT6 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDH20Q9HBT6 AC117947.1-201ENST00000427448 529 ntBASIC16.06■□□□□ 0.16
CDH20Q9HBT6 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.06■□□□□ 0.16
CDH20Q9HBT6 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.06■□□□□ 0.16
CDH20Q9HBT6 FAM210CP-201ENST00000445714 574 ntBASIC16.06■□□□□ 0.16
CDH20Q9HBT6 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.06■□□□□ 0.16
CDH20Q9HBT6 YBX1P2-201ENST00000489612 999 ntBASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms