Protein–RNA interactions for Protein: Q9H2H0

CXXC4, CXXC-type zinc finger protein 4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4Q9H2H0 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
CXXC4Q9H2H0 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CXXC4Q9H2H0 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.03■□□□□ 0.16
CXXC4Q9H2H0 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CXXC4Q9H2H0 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CXXC4Q9H2H0 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CXXC4Q9H2H0 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.03■□□□□ 0.16
CXXC4Q9H2H0 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CXXC4Q9H2H0 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
CXXC4Q9H2H0 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CXXC4Q9H2H0 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CXXC4Q9H2H0 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.03■□□□□ 0.16
CXXC4Q9H2H0 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.03■□□□□ 0.16
CXXC4Q9H2H0 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CXXC4Q9H2H0 AC079776.4-201ENST00000511039 504 ntBASIC16.03■□□□□ 0.16
CXXC4Q9H2H0 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.03■□□□□ 0.16
CXXC4Q9H2H0 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CXXC4Q9H2H0 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.03■□□□□ 0.16
CXXC4Q9H2H0 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.03■□□□□ 0.16
CXXC4Q9H2H0 TPSP2-201ENST00000561760 610 ntBASIC16.03■□□□□ 0.16
CXXC4Q9H2H0 AC012615.1-201ENST00000565797 1299 ntBASIC16.03■□□□□ 0.16
CXXC4Q9H2H0 AL121912.1-201ENST00000603683 238 ntBASIC16.03■□□□□ 0.16
CXXC4Q9H2H0 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CXXC4Q9H2H0 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.03■□□□□ 0.16
CXXC4Q9H2H0 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
CXXC4Q9H2H0 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CXXC4Q9H2H0 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.03■□□□□ 0.16
CXXC4Q9H2H0 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CXXC4Q9H2H0 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CXXC4Q9H2H0 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CXXC4Q9H2H0 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.03■□□□□ 0.16
CXXC4Q9H2H0 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CXXC4Q9H2H0 KRT8P32-201ENST00000512863 1461 ntBASIC16.03■□□□□ 0.16
CXXC4Q9H2H0 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CXXC4Q9H2H0 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CXXC4Q9H2H0 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CXXC4Q9H2H0 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.02■□□□□ 0.16
CXXC4Q9H2H0 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CXXC4Q9H2H0 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CXXC4Q9H2H0 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CXXC4Q9H2H0 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CXXC4Q9H2H0 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.02■□□□□ 0.16
CXXC4Q9H2H0 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CXXC4Q9H2H0 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CXXC4Q9H2H0 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CXXC4Q9H2H0 HLA-A-201ENST00000376802 1334 ntBASIC16.02■□□□□ 0.16
CXXC4Q9H2H0 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
CXXC4Q9H2H0 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
CXXC4Q9H2H0 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CXXC4Q9H2H0 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CXXC4Q9H2H0 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CXXC4Q9H2H0 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CXXC4Q9H2H0 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.02■□□□□ 0.16
CXXC4Q9H2H0 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
CXXC4Q9H2H0 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.02■□□□□ 0.16
CXXC4Q9H2H0 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.02■□□□□ 0.16
CXXC4Q9H2H0 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CXXC4Q9H2H0 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.02■□□□□ 0.16
CXXC4Q9H2H0 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.02■□□□□ 0.16
CXXC4Q9H2H0 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.02■□□□□ 0.16
CXXC4Q9H2H0 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.02■□□□□ 0.16
CXXC4Q9H2H0 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.02■□□□□ 0.16
CXXC4Q9H2H0 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
CXXC4Q9H2H0 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
CXXC4Q9H2H0 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.02■□□□□ 0.15
CXXC4Q9H2H0 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CXXC4Q9H2H0 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
CXXC4Q9H2H0 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CXXC4Q9H2H0 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CXXC4Q9H2H0 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CXXC4Q9H2H0 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CXXC4Q9H2H0 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.02■□□□□ 0.15
CXXC4Q9H2H0 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CXXC4Q9H2H0 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.01■□□□□ 0.15
CXXC4Q9H2H0 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CXXC4Q9H2H0 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CXXC4Q9H2H0 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CXXC4Q9H2H0 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CXXC4Q9H2H0 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CXXC4Q9H2H0 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CXXC4Q9H2H0 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
CXXC4Q9H2H0 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CXXC4Q9H2H0 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CXXC4Q9H2H0 MRPL3P1-201ENST00000400109 1033 ntBASIC16.01■□□□□ 0.15
CXXC4Q9H2H0 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.01■□□□□ 0.15
CXXC4Q9H2H0 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.01■□□□□ 0.15
CXXC4Q9H2H0 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.01■□□□□ 0.15
CXXC4Q9H2H0 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CXXC4Q9H2H0 AC120114.3-201ENST00000611923 658 ntBASIC16.01■□□□□ 0.15
CXXC4Q9H2H0 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CXXC4Q9H2H0 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.01■□□□□ 0.15
CXXC4Q9H2H0 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.01■□□□□ 0.15
CXXC4Q9H2H0 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.01■□□□□ 0.15
CXXC4Q9H2H0 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CXXC4Q9H2H0 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CXXC4Q9H2H0 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
CXXC4Q9H2H0 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CXXC4Q9H2H0 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CXXC4Q9H2H0 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.01■□□□□ 0.15
CXXC4Q9H2H0 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms