Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC21.94■■□□□ 1.1
UPF3BQ9BZI7 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
UPF3BQ9BZI7 HIST1H2APS4-201ENST00000362070 348 ntBASIC21.94■■□□□ 1.1
UPF3BQ9BZI7 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
UPF3BQ9BZI7 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC21.94■■□□□ 1.1
UPF3BQ9BZI7 TSPY15P-201ENST00000457163 923 ntBASIC21.94■■□□□ 1.1
UPF3BQ9BZI7 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC21.94■■□□□ 1.1
UPF3BQ9BZI7 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
UPF3BQ9BZI7 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
UPF3BQ9BZI7 AL355075.4-201ENST00000554988 638 ntBASIC21.94■■□□□ 1.1
UPF3BQ9BZI7 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21.94■■□□□ 1.1
UPF3BQ9BZI7 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
UPF3BQ9BZI7 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC21.94■■□□□ 1.1
UPF3BQ9BZI7 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
UPF3BQ9BZI7 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
UPF3BQ9BZI7 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC21.94■■□□□ 1.1
UPF3BQ9BZI7 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
UPF3BQ9BZI7 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
UPF3BQ9BZI7 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
UPF3BQ9BZI7 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
UPF3BQ9BZI7 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC21.94■■□□□ 1.1
UPF3BQ9BZI7 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
UPF3BQ9BZI7 AC008764.6-201ENST00000595909 2069 ntBASIC21.94■■□□□ 1.1
UPF3BQ9BZI7 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
UPF3BQ9BZI7 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
UPF3BQ9BZI7 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
UPF3BQ9BZI7 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
UPF3BQ9BZI7 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
UPF3BQ9BZI7 MIR1238-201ENST00000408483 83 ntBASIC21.93■■□□□ 1.1
UPF3BQ9BZI7 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC21.93■■□□□ 1.1
UPF3BQ9BZI7 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC21.93■■□□□ 1.1
UPF3BQ9BZI7 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.93■■□□□ 1.1
UPF3BQ9BZI7 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC21.93■■□□□ 1.1
UPF3BQ9BZI7 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.93■■□□□ 1.1
UPF3BQ9BZI7 FITM1-202ENST00000559294 800 ntBASIC21.93■■□□□ 1.1
UPF3BQ9BZI7 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
UPF3BQ9BZI7 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
UPF3BQ9BZI7 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
UPF3BQ9BZI7 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
UPF3BQ9BZI7 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC21.92■■□□□ 1.1
UPF3BQ9BZI7 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
UPF3BQ9BZI7 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
UPF3BQ9BZI7 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
UPF3BQ9BZI7 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC21.92■■□□□ 1.1
UPF3BQ9BZI7 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
UPF3BQ9BZI7 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
UPF3BQ9BZI7 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
UPF3BQ9BZI7 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
UPF3BQ9BZI7 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
UPF3BQ9BZI7 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
UPF3BQ9BZI7 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.92■■□□□ 1.1
UPF3BQ9BZI7 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC21.92■■□□□ 1.1
UPF3BQ9BZI7 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
UPF3BQ9BZI7 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
UPF3BQ9BZI7 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC21.92■■□□□ 1.1
UPF3BQ9BZI7 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
UPF3BQ9BZI7 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
UPF3BQ9BZI7 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.92■■□□□ 1.1
UPF3BQ9BZI7 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
UPF3BQ9BZI7 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
UPF3BQ9BZI7 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
UPF3BQ9BZI7 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
UPF3BQ9BZI7 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
UPF3BQ9BZI7 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
UPF3BQ9BZI7 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC21.92■■□□□ 1.1
UPF3BQ9BZI7 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
UPF3BQ9BZI7 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC21.92■■□□□ 1.1
UPF3BQ9BZI7 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
UPF3BQ9BZI7 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC21.91■■□□□ 1.1
UPF3BQ9BZI7 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
UPF3BQ9BZI7 UROS-202ENST00000368778 1556 ntTSL 2 BASIC21.91■■□□□ 1.1
UPF3BQ9BZI7 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
UPF3BQ9BZI7 AC092338.2-201ENST00000568827 1415 ntBASIC21.91■■□□□ 1.1
UPF3BQ9BZI7 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
UPF3BQ9BZI7 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
UPF3BQ9BZI7 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
UPF3BQ9BZI7 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
UPF3BQ9BZI7 AP000593.1-201ENST00000393668 712 ntBASIC21.91■■□□□ 1.1
UPF3BQ9BZI7 SLC25A1P2-201ENST00000430693 912 ntBASIC21.91■■□□□ 1.1
UPF3BQ9BZI7 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC21.91■■□□□ 1.1
UPF3BQ9BZI7 TK2-213ENST00000563369 882 ntTSL 5 BASIC21.91■■□□□ 1.1
UPF3BQ9BZI7 AL353719.1-201ENST00000566847 864 ntBASIC21.91■■□□□ 1.1
UPF3BQ9BZI7 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
UPF3BQ9BZI7 CR769767.2-201ENST00000622735 460 ntBASIC21.91■■□□□ 1.1
UPF3BQ9BZI7 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC21.91■■□□□ 1.1
UPF3BQ9BZI7 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
UPF3BQ9BZI7 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC21.9■■□□□ 1.1
UPF3BQ9BZI7 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
UPF3BQ9BZI7 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
UPF3BQ9BZI7 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
UPF3BQ9BZI7 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
UPF3BQ9BZI7 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
UPF3BQ9BZI7 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
UPF3BQ9BZI7 INGX-201ENST00000359239 846 ntBASIC21.9■■□□□ 1.1
UPF3BQ9BZI7 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC21.9■■□□□ 1.1
UPF3BQ9BZI7 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC21.9■■□□□ 1.1
UPF3BQ9BZI7 NAT14-202ENST00000587400 416 ntTSL 5 BASIC21.9■■□□□ 1.1
UPF3BQ9BZI7 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
UPF3BQ9BZI7 SDHAP2-201ENST00000455183 2001 ntBASIC21.9■■□□□ 1.1
UPF3BQ9BZI7 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms