Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.56■□□□□ 0.72
PAAF1Q9BRP4 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.56■□□□□ 0.72
PAAF1Q9BRP4 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.56■□□□□ 0.72
PAAF1Q9BRP4 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PAAF1Q9BRP4 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.56■□□□□ 0.72
PAAF1Q9BRP4 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
PAAF1Q9BRP4 AC079781.3-201ENST00000449110 356 ntBASIC19.56■□□□□ 0.72
PAAF1Q9BRP4 FDX1P1-201ENST00000449115 551 ntBASIC19.56■□□□□ 0.72
PAAF1Q9BRP4 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
PAAF1Q9BRP4 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.56■□□□□ 0.72
PAAF1Q9BRP4 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.56■□□□□ 0.72
PAAF1Q9BRP4 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.56■□□□□ 0.72
PAAF1Q9BRP4 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.56■□□□□ 0.72
PAAF1Q9BRP4 AL031008.1-201ENST00000619963 541 ntBASIC19.56■□□□□ 0.72
PAAF1Q9BRP4 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.56■□□□□ 0.72
PAAF1Q9BRP4 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.56■□□□□ 0.72
PAAF1Q9BRP4 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PAAF1Q9BRP4 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PAAF1Q9BRP4 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.55■□□□□ 0.72
PAAF1Q9BRP4 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PAAF1Q9BRP4 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PAAF1Q9BRP4 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.55■□□□□ 0.72
PAAF1Q9BRP4 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PAAF1Q9BRP4 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PAAF1Q9BRP4 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
PAAF1Q9BRP4 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PAAF1Q9BRP4 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PAAF1Q9BRP4 AC113404.2-201ENST00000507884 177 ntBASIC19.55■□□□□ 0.72
PAAF1Q9BRP4 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.55■□□□□ 0.72
PAAF1Q9BRP4 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PAAF1Q9BRP4 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PAAF1Q9BRP4 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.55■□□□□ 0.72
PAAF1Q9BRP4 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PAAF1Q9BRP4 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.55■□□□□ 0.72
PAAF1Q9BRP4 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PAAF1Q9BRP4 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PAAF1Q9BRP4 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
PAAF1Q9BRP4 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.55■□□□□ 0.72
PAAF1Q9BRP4 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PAAF1Q9BRP4 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PAAF1Q9BRP4 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
PAAF1Q9BRP4 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.54■□□□□ 0.72
PAAF1Q9BRP4 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PAAF1Q9BRP4 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PAAF1Q9BRP4 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PAAF1Q9BRP4 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PAAF1Q9BRP4 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PAAF1Q9BRP4 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
PAAF1Q9BRP4 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
PAAF1Q9BRP4 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PAAF1Q9BRP4 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PAAF1Q9BRP4 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.54■□□□□ 0.72
PAAF1Q9BRP4 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.54■□□□□ 0.72
PAAF1Q9BRP4 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.54■□□□□ 0.72
PAAF1Q9BRP4 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PAAF1Q9BRP4 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.54■□□□□ 0.72
PAAF1Q9BRP4 AC011840.4-201ENST00000578471 627 ntBASIC19.54■□□□□ 0.72
PAAF1Q9BRP4 AC104692.2-201ENST00000603054 253 ntBASIC19.54■□□□□ 0.72
PAAF1Q9BRP4 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.54■□□□□ 0.72
PAAF1Q9BRP4 AL353801.3-201ENST00000609898 542 ntBASIC19.54■□□□□ 0.72
PAAF1Q9BRP4 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PAAF1Q9BRP4 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.54■□□□□ 0.72
PAAF1Q9BRP4 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.54■□□□□ 0.72
PAAF1Q9BRP4 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PAAF1Q9BRP4 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
PAAF1Q9BRP4 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PAAF1Q9BRP4 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PAAF1Q9BRP4 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PAAF1Q9BRP4 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PAAF1Q9BRP4 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PAAF1Q9BRP4 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.53■□□□□ 0.72
PAAF1Q9BRP4 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PAAF1Q9BRP4 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PAAF1Q9BRP4 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PAAF1Q9BRP4 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
PAAF1Q9BRP4 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
PAAF1Q9BRP4 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PAAF1Q9BRP4 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.53■□□□□ 0.72
PAAF1Q9BRP4 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
PAAF1Q9BRP4 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
PAAF1Q9BRP4 AC009078.2-202ENST00000463353 338 ntBASIC19.53■□□□□ 0.72
PAAF1Q9BRP4 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.53■□□□□ 0.72
PAAF1Q9BRP4 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.53■□□□□ 0.72
PAAF1Q9BRP4 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.53■□□□□ 0.72
PAAF1Q9BRP4 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.53■□□□□ 0.72
PAAF1Q9BRP4 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PAAF1Q9BRP4 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PAAF1Q9BRP4 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
PAAF1Q9BRP4 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PAAF1Q9BRP4 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PAAF1Q9BRP4 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PAAF1Q9BRP4 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.53■□□□□ 0.72
PAAF1Q9BRP4 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.53■□□□□ 0.72
PAAF1Q9BRP4 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PAAF1Q9BRP4 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.52■□□□□ 0.72
PAAF1Q9BRP4 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
PAAF1Q9BRP4 AC126763.1-201ENST00000552015 2118 ntBASIC19.52■□□□□ 0.72
PAAF1Q9BRP4 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.52■□□□□ 0.72
PAAF1Q9BRP4 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
PAAF1Q9BRP4 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms