Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
VGLL1Q99990 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VGLL1Q99990 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC13.96□□□□□ -0.17
VGLL1Q99990 FLYWCH1P1-201ENST00000460917 1874 ntBASIC13.96□□□□□ -0.17
VGLL1Q99990 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VGLL1Q99990 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
VGLL1Q99990 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VGLL1Q99990 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
VGLL1Q99990 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VGLL1Q99990 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
VGLL1Q99990 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC13.96□□□□□ -0.17
VGLL1Q99990 RPS2P4-201ENST00000476944 856 ntBASIC13.96□□□□□ -0.17
VGLL1Q99990 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC13.96□□□□□ -0.17
VGLL1Q99990 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC13.96□□□□□ -0.17
VGLL1Q99990 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
VGLL1Q99990 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
VGLL1Q99990 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC13.96□□□□□ -0.17
VGLL1Q99990 AC110285.5-201ENST00000611501 352 ntBASIC13.96□□□□□ -0.17
VGLL1Q99990 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
VGLL1Q99990 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC13.96□□□□□ -0.17
VGLL1Q99990 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VGLL1Q99990 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
VGLL1Q99990 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VGLL1Q99990 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VGLL1Q99990 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
VGLL1Q99990 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
VGLL1Q99990 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
VGLL1Q99990 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
VGLL1Q99990 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.18
VGLL1Q99990 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
VGLL1Q99990 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
VGLL1Q99990 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC13.96□□□□□ -0.18
VGLL1Q99990 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
VGLL1Q99990 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
VGLL1Q99990 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.18
VGLL1Q99990 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC13.96□□□□□ -0.18
VGLL1Q99990 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VGLL1Q99990 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VGLL1Q99990 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
VGLL1Q99990 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
VGLL1Q99990 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VGLL1Q99990 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VGLL1Q99990 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
VGLL1Q99990 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VGLL1Q99990 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VGLL1Q99990 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VGLL1Q99990 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC13.95□□□□□ -0.18
VGLL1Q99990 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
VGLL1Q99990 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC13.95□□□□□ -0.18
VGLL1Q99990 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VGLL1Q99990 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
VGLL1Q99990 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VGLL1Q99990 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VGLL1Q99990 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC13.95□□□□□ -0.18
VGLL1Q99990 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VGLL1Q99990 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VGLL1Q99990 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VGLL1Q99990 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VGLL1Q99990 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VGLL1Q99990 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC13.95□□□□□ -0.18
VGLL1Q99990 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VGLL1Q99990 AC004951.3-201ENST00000418645 1148 ntBASIC13.95□□□□□ -0.18
VGLL1Q99990 AP002982.1-201ENST00000492365 877 ntBASIC13.95□□□□□ -0.18
VGLL1Q99990 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
VGLL1Q99990 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC13.95□□□□□ -0.18
VGLL1Q99990 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC13.95□□□□□ -0.18
VGLL1Q99990 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VGLL1Q99990 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC13.95□□□□□ -0.18
VGLL1Q99990 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
VGLL1Q99990 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VGLL1Q99990 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
VGLL1Q99990 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC13.95□□□□□ -0.18
VGLL1Q99990 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VGLL1Q99990 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
VGLL1Q99990 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
VGLL1Q99990 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
VGLL1Q99990 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC13.95□□□□□ -0.18
VGLL1Q99990 AC134043.2-201ENST00000624206 2238 ntBASIC13.95□□□□□ -0.18
VGLL1Q99990 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VGLL1Q99990 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
VGLL1Q99990 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC13.95□□□□□ -0.18
VGLL1Q99990 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC13.95□□□□□ -0.18
VGLL1Q99990 AC008556.1-201ENST00000610908 2040 ntBASIC13.95□□□□□ -0.18
VGLL1Q99990 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VGLL1Q99990 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
VGLL1Q99990 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
VGLL1Q99990 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
VGLL1Q99990 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VGLL1Q99990 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC13.95□□□□□ -0.18
VGLL1Q99990 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
VGLL1Q99990 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
VGLL1Q99990 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC13.94□□□□□ -0.18
VGLL1Q99990 REXO1L9P-201ENST00000604264 2108 ntBASIC13.94□□□□□ -0.18
VGLL1Q99990 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
VGLL1Q99990 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VGLL1Q99990 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VGLL1Q99990 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
VGLL1Q99990 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
VGLL1Q99990 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC13.94□□□□□ -0.18
VGLL1Q99990 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms