Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NR1H4Q96RI1 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NR1H4Q96RI1 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NR1H4Q96RI1 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.33■□□□□ 0.36
NR1H4Q96RI1 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.33■□□□□ 0.36
NR1H4Q96RI1 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.33■□□□□ 0.36
NR1H4Q96RI1 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
NR1H4Q96RI1 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
NR1H4Q96RI1 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NR1H4Q96RI1 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NR1H4Q96RI1 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
NR1H4Q96RI1 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NR1H4Q96RI1 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.32■□□□□ 0.36
NR1H4Q96RI1 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NR1H4Q96RI1 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NR1H4Q96RI1 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NR1H4Q96RI1 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NR1H4Q96RI1 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.32■□□□□ 0.36
NR1H4Q96RI1 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NR1H4Q96RI1 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NR1H4Q96RI1 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NR1H4Q96RI1 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NR1H4Q96RI1 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NR1H4Q96RI1 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
NR1H4Q96RI1 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC17.32■□□□□ 0.36
NR1H4Q96RI1 ZNRF2P3-201ENST00000424200 374 ntBASIC17.32■□□□□ 0.36
NR1H4Q96RI1 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.32■□□□□ 0.36
NR1H4Q96RI1 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NR1H4Q96RI1 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17.32■□□□□ 0.36
NR1H4Q96RI1 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.32■□□□□ 0.36
NR1H4Q96RI1 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.32■□□□□ 0.36
NR1H4Q96RI1 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NR1H4Q96RI1 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NR1H4Q96RI1 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
NR1H4Q96RI1 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.32■□□□□ 0.36
NR1H4Q96RI1 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NR1H4Q96RI1 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NR1H4Q96RI1 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NR1H4Q96RI1 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NR1H4Q96RI1 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NR1H4Q96RI1 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
NR1H4Q96RI1 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NR1H4Q96RI1 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NR1H4Q96RI1 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.31■□□□□ 0.36
NR1H4Q96RI1 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NR1H4Q96RI1 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
NR1H4Q96RI1 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
NR1H4Q96RI1 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NR1H4Q96RI1 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NR1H4Q96RI1 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NR1H4Q96RI1 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
NR1H4Q96RI1 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.31■□□□□ 0.36
NR1H4Q96RI1 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.31■□□□□ 0.36
NR1H4Q96RI1 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.31■□□□□ 0.36
NR1H4Q96RI1 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17.31■□□□□ 0.36
NR1H4Q96RI1 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NR1H4Q96RI1 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.31■□□□□ 0.36
NR1H4Q96RI1 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
NR1H4Q96RI1 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NR1H4Q96RI1 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.31■□□□□ 0.36
NR1H4Q96RI1 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
NR1H4Q96RI1 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.31■□□□□ 0.36
NR1H4Q96RI1 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NR1H4Q96RI1 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
NR1H4Q96RI1 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.31■□□□□ 0.36
NR1H4Q96RI1 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NR1H4Q96RI1 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NR1H4Q96RI1 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
NR1H4Q96RI1 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NR1H4Q96RI1 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
NR1H4Q96RI1 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NR1H4Q96RI1 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NR1H4Q96RI1 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NR1H4Q96RI1 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NR1H4Q96RI1 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
NR1H4Q96RI1 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NR1H4Q96RI1 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
NR1H4Q96RI1 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
NR1H4Q96RI1 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.3■□□□□ 0.36
NR1H4Q96RI1 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NR1H4Q96RI1 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
NR1H4Q96RI1 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NR1H4Q96RI1 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
NR1H4Q96RI1 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
NR1H4Q96RI1 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.3■□□□□ 0.36
NR1H4Q96RI1 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.3■□□□□ 0.36
NR1H4Q96RI1 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.3■□□□□ 0.36
NR1H4Q96RI1 KRT18P20-201ENST00000548986 1279 ntBASIC17.3■□□□□ 0.36
NR1H4Q96RI1 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.3■□□□□ 0.36
NR1H4Q96RI1 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
NR1H4Q96RI1 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
NR1H4Q96RI1 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
NR1H4Q96RI1 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NR1H4Q96RI1 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.3■□□□□ 0.36
NR1H4Q96RI1 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NR1H4Q96RI1 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
NR1H4Q96RI1 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.3■□□□□ 0.36
NR1H4Q96RI1 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NR1H4Q96RI1 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
NR1H4Q96RI1 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms