Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL21A1Q96P44 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL21A1Q96P44 FZD10-202ENST00000539839 3282 ntBASIC17.39■□□□□ 0.38
COL21A1Q96P44 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
COL21A1Q96P44 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
COL21A1Q96P44 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL21A1Q96P44 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.39■□□□□ 0.37
COL21A1Q96P44 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL21A1Q96P44 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL21A1Q96P44 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.39■□□□□ 0.37
COL21A1Q96P44 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
COL21A1Q96P44 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.39■□□□□ 0.37
COL21A1Q96P44 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL21A1Q96P44 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
COL21A1Q96P44 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
COL21A1Q96P44 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL21A1Q96P44 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL21A1Q96P44 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.39■□□□□ 0.37
COL21A1Q96P44 AC128688.1-201ENST00000487626 519 ntBASIC17.39■□□□□ 0.37
COL21A1Q96P44 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.39■□□□□ 0.37
COL21A1Q96P44 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
COL21A1Q96P44 AL023803.3-201ENST00000615559 522 ntBASIC17.39■□□□□ 0.37
COL21A1Q96P44 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
COL21A1Q96P44 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL21A1Q96P44 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
COL21A1Q96P44 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL21A1Q96P44 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
COL21A1Q96P44 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL21A1Q96P44 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.39■□□□□ 0.37
COL21A1Q96P44 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL21A1Q96P44 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.39■□□□□ 0.37
COL21A1Q96P44 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL21A1Q96P44 LINC01568-207ENST00000641790 1380 ntBASIC17.39■□□□□ 0.37
COL21A1Q96P44 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL21A1Q96P44 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.39■□□□□ 0.37
COL21A1Q96P44 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.38■□□□□ 0.37
COL21A1Q96P44 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL21A1Q96P44 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.38■□□□□ 0.37
COL21A1Q96P44 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL21A1Q96P44 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
COL21A1Q96P44 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL21A1Q96P44 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL21A1Q96P44 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL21A1Q96P44 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL21A1Q96P44 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL21A1Q96P44 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.38■□□□□ 0.37
COL21A1Q96P44 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
COL21A1Q96P44 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
COL21A1Q96P44 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.38■□□□□ 0.37
COL21A1Q96P44 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL21A1Q96P44 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.38■□□□□ 0.37
COL21A1Q96P44 AL353719.1-201ENST00000566847 864 ntBASIC17.38■□□□□ 0.37
COL21A1Q96P44 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
COL21A1Q96P44 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
COL21A1Q96P44 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.38■□□□□ 0.37
COL21A1Q96P44 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL21A1Q96P44 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL21A1Q96P44 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.38■□□□□ 0.37
COL21A1Q96P44 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.38■□□□□ 0.37
COL21A1Q96P44 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
COL21A1Q96P44 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
COL21A1Q96P44 AL357033.4-201ENST00000617703 1807 ntBASIC17.37■□□□□ 0.37
COL21A1Q96P44 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.37■□□□□ 0.37
COL21A1Q96P44 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL21A1Q96P44 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
COL21A1Q96P44 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
COL21A1Q96P44 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL21A1Q96P44 ABALON-201ENST00000629058 1903 ntBASIC17.37■□□□□ 0.37
COL21A1Q96P44 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
COL21A1Q96P44 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
COL21A1Q96P44 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
COL21A1Q96P44 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
COL21A1Q96P44 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL21A1Q96P44 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.37■□□□□ 0.37
COL21A1Q96P44 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
COL21A1Q96P44 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.37■□□□□ 0.37
COL21A1Q96P44 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
COL21A1Q96P44 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL21A1Q96P44 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.37■□□□□ 0.37
COL21A1Q96P44 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL21A1Q96P44 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.37■□□□□ 0.37
COL21A1Q96P44 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.37■□□□□ 0.37
COL21A1Q96P44 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.37■□□□□ 0.37
COL21A1Q96P44 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
COL21A1Q96P44 AC133561.5-201ENST00000635547 218 ntBASIC17.37■□□□□ 0.37
COL21A1Q96P44 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL21A1Q96P44 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
COL21A1Q96P44 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
COL21A1Q96P44 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.37■□□□□ 0.37
COL21A1Q96P44 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL21A1Q96P44 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.37■□□□□ 0.37
COL21A1Q96P44 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL21A1Q96P44 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.37■□□□□ 0.37
COL21A1Q96P44 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
COL21A1Q96P44 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL21A1Q96P44 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL21A1Q96P44 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL21A1Q96P44 AC092338.2-201ENST00000568827 1415 ntBASIC17.37■□□□□ 0.37
COL21A1Q96P44 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL21A1Q96P44 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms