Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RPRD1AQ96P16 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.92■□□□□ 0.62
RPRD1AQ96P16 AL645929.1-201ENST00000420084 975 ntBASIC18.92■□□□□ 0.62
RPRD1AQ96P16 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.92■□□□□ 0.62
RPRD1AQ96P16 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.92■□□□□ 0.62
RPRD1AQ96P16 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPRD1AQ96P16 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.92■□□□□ 0.62
RPRD1AQ96P16 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RPRD1AQ96P16 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPRD1AQ96P16 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
RPRD1AQ96P16 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.91■□□□□ 0.62
RPRD1AQ96P16 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPRD1AQ96P16 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPRD1AQ96P16 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
RPRD1AQ96P16 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RPRD1AQ96P16 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPRD1AQ96P16 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
RPRD1AQ96P16 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.91■□□□□ 0.62
RPRD1AQ96P16 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.91■□□□□ 0.62
RPRD1AQ96P16 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.91■□□□□ 0.62
RPRD1AQ96P16 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.91■□□□□ 0.62
RPRD1AQ96P16 AC091076.1-201ENST00000610741 619 ntBASIC18.91■□□□□ 0.62
RPRD1AQ96P16 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RPRD1AQ96P16 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPRD1AQ96P16 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RPRD1AQ96P16 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPRD1AQ96P16 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPRD1AQ96P16 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPRD1AQ96P16 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPRD1AQ96P16 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.9■□□□□ 0.62
RPRD1AQ96P16 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPRD1AQ96P16 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RPRD1AQ96P16 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.9■□□□□ 0.62
RPRD1AQ96P16 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPRD1AQ96P16 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RPRD1AQ96P16 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RPRD1AQ96P16 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPRD1AQ96P16 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.9■□□□□ 0.62
RPRD1AQ96P16 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.9■□□□□ 0.62
RPRD1AQ96P16 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPRD1AQ96P16 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.9■□□□□ 0.62
RPRD1AQ96P16 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
RPRD1AQ96P16 AP000550.4-202ENST00000639755 178 ntBASIC18.9■□□□□ 0.62
RPRD1AQ96P16 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RPRD1AQ96P16 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPRD1AQ96P16 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPRD1AQ96P16 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.9■□□□□ 0.62
RPRD1AQ96P16 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RPRD1AQ96P16 IER3-202ENST00000376377 1350 ntBASIC18.9■□□□□ 0.62
RPRD1AQ96P16 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPRD1AQ96P16 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.9■□□□□ 0.62
RPRD1AQ96P16 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
RPRD1AQ96P16 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.9■□□□□ 0.62
RPRD1AQ96P16 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.9■□□□□ 0.62
RPRD1AQ96P16 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.9■□□□□ 0.62
RPRD1AQ96P16 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.9■□□□□ 0.62
RPRD1AQ96P16 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.9■□□□□ 0.62
RPRD1AQ96P16 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.89■□□□□ 0.62
RPRD1AQ96P16 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.89■□□□□ 0.62
RPRD1AQ96P16 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.62
RPRD1AQ96P16 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.89■□□□□ 0.62
RPRD1AQ96P16 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
RPRD1AQ96P16 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
RPRD1AQ96P16 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RPRD1AQ96P16 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.89■□□□□ 0.61
RPRD1AQ96P16 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
RPRD1AQ96P16 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.89■□□□□ 0.61
RPRD1AQ96P16 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.89■□□□□ 0.61
RPRD1AQ96P16 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RPRD1AQ96P16 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RPRD1AQ96P16 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
RPRD1AQ96P16 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.89■□□□□ 0.61
RPRD1AQ96P16 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RPRD1AQ96P16 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.89■□□□□ 0.61
RPRD1AQ96P16 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RPRD1AQ96P16 MIR662-201ENST00000384847 95 ntBASIC18.89■□□□□ 0.61
RPRD1AQ96P16 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RPRD1AQ96P16 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RPRD1AQ96P16 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RPRD1AQ96P16 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.89■□□□□ 0.61
RPRD1AQ96P16 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.89■□□□□ 0.61
RPRD1AQ96P16 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
RPRD1AQ96P16 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.89■□□□□ 0.61
RPRD1AQ96P16 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.89■□□□□ 0.61
RPRD1AQ96P16 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RPRD1AQ96P16 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.89■□□□□ 0.61
RPRD1AQ96P16 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.89■□□□□ 0.61
RPRD1AQ96P16 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
RPRD1AQ96P16 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.89■□□□□ 0.61
RPRD1AQ96P16 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RPRD1AQ96P16 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.89■□□□□ 0.61
RPRD1AQ96P16 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RPRD1AQ96P16 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.89■□□□□ 0.61
RPRD1AQ96P16 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RPRD1AQ96P16 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
RPRD1AQ96P16 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
RPRD1AQ96P16 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RPRD1AQ96P16 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.89■□□□□ 0.61
RPRD1AQ96P16 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RPRD1AQ96P16 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms