Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
C9orf72Q96LT7 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
C9orf72Q96LT7 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
C9orf72Q96LT7 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
C9orf72Q96LT7 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
C9orf72Q96LT7 BCL2-203ENST00000589955 5011 ntBASIC18.95■□□□□ 0.62
C9orf72Q96LT7 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
C9orf72Q96LT7 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
C9orf72Q96LT7 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
C9orf72Q96LT7 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
C9orf72Q96LT7 NIFKP9-201ENST00000419265 221 ntBASIC18.95■□□□□ 0.62
C9orf72Q96LT7 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.95■□□□□ 0.62
C9orf72Q96LT7 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.95■□□□□ 0.62
C9orf72Q96LT7 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.95■□□□□ 0.62
C9orf72Q96LT7 LINC01023-201ENST00000606054 436 ntBASIC18.95■□□□□ 0.62
C9orf72Q96LT7 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
C9orf72Q96LT7 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
C9orf72Q96LT7 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
C9orf72Q96LT7 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
C9orf72Q96LT7 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
C9orf72Q96LT7 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
C9orf72Q96LT7 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.95■□□□□ 0.62
C9orf72Q96LT7 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.95■□□□□ 0.62
C9orf72Q96LT7 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.95■□□□□ 0.62
C9orf72Q96LT7 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.95■□□□□ 0.62
C9orf72Q96LT7 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
C9orf72Q96LT7 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
C9orf72Q96LT7 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
C9orf72Q96LT7 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
C9orf72Q96LT7 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
C9orf72Q96LT7 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
C9orf72Q96LT7 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.94■□□□□ 0.62
C9orf72Q96LT7 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
C9orf72Q96LT7 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
C9orf72Q96LT7 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
C9orf72Q96LT7 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
C9orf72Q96LT7 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
C9orf72Q96LT7 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
C9orf72Q96LT7 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
C9orf72Q96LT7 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.94■□□□□ 0.62
C9orf72Q96LT7 KSR1P1-201ENST00000446298 240 ntBASIC18.94■□□□□ 0.62
C9orf72Q96LT7 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.94■□□□□ 0.62
C9orf72Q96LT7 NUDT16P1-203ENST00000513809 620 ntBASIC18.94■□□□□ 0.62
C9orf72Q96LT7 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.94■□□□□ 0.62
C9orf72Q96LT7 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
C9orf72Q96LT7 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
C9orf72Q96LT7 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
C9orf72Q96LT7 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
C9orf72Q96LT7 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.94■□□□□ 0.62
C9orf72Q96LT7 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.94■□□□□ 0.62
C9orf72Q96LT7 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
C9orf72Q96LT7 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
C9orf72Q96LT7 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
C9orf72Q96LT7 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
C9orf72Q96LT7 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.94■□□□□ 0.62
C9orf72Q96LT7 REXO1L9P-201ENST00000604264 2108 ntBASIC18.94■□□□□ 0.62
C9orf72Q96LT7 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
C9orf72Q96LT7 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
C9orf72Q96LT7 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.93■□□□□ 0.62
C9orf72Q96LT7 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
C9orf72Q96LT7 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
C9orf72Q96LT7 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.93■□□□□ 0.62
C9orf72Q96LT7 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
C9orf72Q96LT7 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
C9orf72Q96LT7 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
C9orf72Q96LT7 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.93■□□□□ 0.62
C9orf72Q96LT7 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
C9orf72Q96LT7 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
C9orf72Q96LT7 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
C9orf72Q96LT7 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
C9orf72Q96LT7 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
C9orf72Q96LT7 AC087499.1-201ENST00000418141 1075 ntBASIC18.93■□□□□ 0.62
C9orf72Q96LT7 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.93■□□□□ 0.62
C9orf72Q96LT7 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.93■□□□□ 0.62
C9orf72Q96LT7 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
C9orf72Q96LT7 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.93■□□□□ 0.62
C9orf72Q96LT7 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.93■□□□□ 0.62
C9orf72Q96LT7 LINC00896-202ENST00000609602 2128 ntBASIC18.93■□□□□ 0.62
C9orf72Q96LT7 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
C9orf72Q96LT7 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
C9orf72Q96LT7 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
C9orf72Q96LT7 AC020916.1-201ENST00000587762 1774 ntBASIC18.93■□□□□ 0.62
C9orf72Q96LT7 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
C9orf72Q96LT7 AC008556.1-201ENST00000610908 2040 ntBASIC18.93■□□□□ 0.62
C9orf72Q96LT7 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.93■□□□□ 0.62
C9orf72Q96LT7 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
C9orf72Q96LT7 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
C9orf72Q96LT7 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.92■□□□□ 0.62
C9orf72Q96LT7 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.92■□□□□ 0.62
C9orf72Q96LT7 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.92■□□□□ 0.62
C9orf72Q96LT7 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
C9orf72Q96LT7 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
C9orf72Q96LT7 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
C9orf72Q96LT7 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.92■□□□□ 0.62
C9orf72Q96LT7 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.92■□□□□ 0.62
C9orf72Q96LT7 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
C9orf72Q96LT7 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.92■□□□□ 0.62
C9orf72Q96LT7 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
C9orf72Q96LT7 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
C9orf72Q96LT7 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms