Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 ABALON-201ENST00000629058 1903 ntBASIC20.27■□□□□ 0.84
RPGRIP1Q96KN7 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPGRIP1Q96KN7 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPGRIP1Q96KN7 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
RPGRIP1Q96KN7 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.27■□□□□ 0.84
RPGRIP1Q96KN7 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RPGRIP1Q96KN7 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
RPGRIP1Q96KN7 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
RPGRIP1Q96KN7 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPGRIP1Q96KN7 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RPGRIP1Q96KN7 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
RPGRIP1Q96KN7 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.26■□□□□ 0.83
RPGRIP1Q96KN7 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPGRIP1Q96KN7 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPGRIP1Q96KN7 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
RPGRIP1Q96KN7 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPGRIP1Q96KN7 WAC-202ENST00000347934 2839 ntTSL 5 BASIC20.26■□□□□ 0.83
RPGRIP1Q96KN7 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RPGRIP1Q96KN7 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC20.26■□□□□ 0.83
RPGRIP1Q96KN7 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPGRIP1Q96KN7 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.26■□□□□ 0.83
RPGRIP1Q96KN7 AL136038.3-201ENST00000561909 1096 ntBASIC20.26■□□□□ 0.83
RPGRIP1Q96KN7 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.26■□□□□ 0.83
RPGRIP1Q96KN7 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.26■□□□□ 0.83
RPGRIP1Q96KN7 AC008622.2-201ENST00000617006 1229 ntBASIC20.26■□□□□ 0.83
RPGRIP1Q96KN7 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.26■□□□□ 0.83
RPGRIP1Q96KN7 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RPGRIP1Q96KN7 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPGRIP1Q96KN7 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPGRIP1Q96KN7 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RPGRIP1Q96KN7 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPGRIP1Q96KN7 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RPGRIP1Q96KN7 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPGRIP1Q96KN7 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
RPGRIP1Q96KN7 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPGRIP1Q96KN7 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPGRIP1Q96KN7 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
RPGRIP1Q96KN7 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC20.25■□□□□ 0.83
RPGRIP1Q96KN7 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
RPGRIP1Q96KN7 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPGRIP1Q96KN7 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC20.25■□□□□ 0.83
RPGRIP1Q96KN7 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
RPGRIP1Q96KN7 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RPGRIP1Q96KN7 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
RPGRIP1Q96KN7 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPGRIP1Q96KN7 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.25■□□□□ 0.83
RPGRIP1Q96KN7 AC246785.2-201ENST00000432512 513 ntBASIC20.25■□□□□ 0.83
RPGRIP1Q96KN7 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.25■□□□□ 0.83
RPGRIP1Q96KN7 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.25■□□□□ 0.83
RPGRIP1Q96KN7 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.25■□□□□ 0.83
RPGRIP1Q96KN7 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.25■□□□□ 0.83
RPGRIP1Q96KN7 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.25■□□□□ 0.83
RPGRIP1Q96KN7 KLK8-205ENST00000593490 267 ntTSL 3 BASIC20.25■□□□□ 0.83
RPGRIP1Q96KN7 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.25■□□□□ 0.83
RPGRIP1Q96KN7 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.25■□□□□ 0.83
RPGRIP1Q96KN7 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RPGRIP1Q96KN7 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPGRIP1Q96KN7 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.25■□□□□ 0.83
RPGRIP1Q96KN7 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RPGRIP1Q96KN7 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
RPGRIP1Q96KN7 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.25■□□□□ 0.83
RPGRIP1Q96KN7 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.25■□□□□ 0.83
RPGRIP1Q96KN7 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.24■□□□□ 0.83
RPGRIP1Q96KN7 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPGRIP1Q96KN7 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPGRIP1Q96KN7 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPGRIP1Q96KN7 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.24■□□□□ 0.83
RPGRIP1Q96KN7 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPGRIP1Q96KN7 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.24■□□□□ 0.83
RPGRIP1Q96KN7 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPGRIP1Q96KN7 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPGRIP1Q96KN7 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPGRIP1Q96KN7 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RPGRIP1Q96KN7 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
RPGRIP1Q96KN7 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPGRIP1Q96KN7 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
RPGRIP1Q96KN7 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPGRIP1Q96KN7 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPGRIP1Q96KN7 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.24■□□□□ 0.83
RPGRIP1Q96KN7 AC112907.2-201ENST00000448639 330 ntBASIC20.24■□□□□ 0.83
RPGRIP1Q96KN7 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RPGRIP1Q96KN7 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.24■□□□□ 0.83
RPGRIP1Q96KN7 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.24■□□□□ 0.83
RPGRIP1Q96KN7 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RPGRIP1Q96KN7 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RPGRIP1Q96KN7 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPGRIP1Q96KN7 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RPGRIP1Q96KN7 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPGRIP1Q96KN7 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.24■□□□□ 0.83
RPGRIP1Q96KN7 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RPGRIP1Q96KN7 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPGRIP1Q96KN7 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPGRIP1Q96KN7 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPGRIP1Q96KN7 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
RPGRIP1Q96KN7 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.23■□□□□ 0.83
RPGRIP1Q96KN7 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPGRIP1Q96KN7 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPGRIP1Q96KN7 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPGRIP1Q96KN7 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
RPGRIP1Q96KN7 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms