Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
APH1AQ96BI3 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
APH1AQ96BI3 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
APH1AQ96BI3 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
APH1AQ96BI3 HBZP1-201ENST00000354915 429 ntBASIC16.28■□□□□ 0.2
APH1AQ96BI3 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
APH1AQ96BI3 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.28■□□□□ 0.2
APH1AQ96BI3 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.28■□□□□ 0.2
APH1AQ96BI3 AC092597.1-201ENST00000487352 616 ntBASIC16.28■□□□□ 0.2
APH1AQ96BI3 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.28■□□□□ 0.2
APH1AQ96BI3 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.28■□□□□ 0.2
APH1AQ96BI3 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.28■□□□□ 0.2
APH1AQ96BI3 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.28■□□□□ 0.2
APH1AQ96BI3 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.28■□□□□ 0.2
APH1AQ96BI3 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.28■□□□□ 0.2
APH1AQ96BI3 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.28■□□□□ 0.2
APH1AQ96BI3 AL121956.5-201ENST00000625261 221 ntBASIC16.28■□□□□ 0.2
APH1AQ96BI3 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
APH1AQ96BI3 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
APH1AQ96BI3 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.28■□□□□ 0.2
APH1AQ96BI3 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
APH1AQ96BI3 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
APH1AQ96BI3 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
APH1AQ96BI3 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.28■□□□□ 0.2
APH1AQ96BI3 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
APH1AQ96BI3 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.28■□□□□ 0.2
APH1AQ96BI3 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.27■□□□□ 0.2
APH1AQ96BI3 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
APH1AQ96BI3 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
APH1AQ96BI3 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
APH1AQ96BI3 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
APH1AQ96BI3 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.27■□□□□ 0.2
APH1AQ96BI3 AL391807.1-203ENST00000604392 2365 ntBASIC16.27■□□□□ 0.2
APH1AQ96BI3 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
APH1AQ96BI3 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
APH1AQ96BI3 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.27■□□□□ 0.2
APH1AQ96BI3 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
APH1AQ96BI3 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
APH1AQ96BI3 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.27■□□□□ 0.2
APH1AQ96BI3 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
APH1AQ96BI3 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.27■□□□□ 0.2
APH1AQ96BI3 ZNF444P1-201ENST00000559497 298 ntBASIC16.27■□□□□ 0.2
APH1AQ96BI3 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
APH1AQ96BI3 HYMAI.1-201ENST00000620949 238 ntBASIC16.27■□□□□ 0.2
APH1AQ96BI3 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.27■□□□□ 0.2
APH1AQ96BI3 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.27■□□□□ 0.2
APH1AQ96BI3 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
APH1AQ96BI3 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
APH1AQ96BI3 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
APH1AQ96BI3 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
APH1AQ96BI3 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
APH1AQ96BI3 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
APH1AQ96BI3 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.27■□□□□ 0.19
APH1AQ96BI3 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
APH1AQ96BI3 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
APH1AQ96BI3 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
APH1AQ96BI3 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
APH1AQ96BI3 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
APH1AQ96BI3 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
APH1AQ96BI3 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
APH1AQ96BI3 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.26■□□□□ 0.19
APH1AQ96BI3 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
APH1AQ96BI3 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.26■□□□□ 0.19
APH1AQ96BI3 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
APH1AQ96BI3 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.26■□□□□ 0.19
APH1AQ96BI3 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.26■□□□□ 0.19
APH1AQ96BI3 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
APH1AQ96BI3 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
APH1AQ96BI3 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
APH1AQ96BI3 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.26■□□□□ 0.19
APH1AQ96BI3 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
APH1AQ96BI3 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
APH1AQ96BI3 VENTXP5-201ENST00000523979 775 ntBASIC16.26■□□□□ 0.19
APH1AQ96BI3 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.26■□□□□ 0.19
APH1AQ96BI3 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.26■□□□□ 0.19
APH1AQ96BI3 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.26■□□□□ 0.19
APH1AQ96BI3 AC083849.1-201ENST00000615227 514 ntBASIC16.26■□□□□ 0.19
APH1AQ96BI3 AC079602.3-201ENST00000623931 403 ntBASIC16.26■□□□□ 0.19
APH1AQ96BI3 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.26■□□□□ 0.19
APH1AQ96BI3 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
APH1AQ96BI3 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
APH1AQ96BI3 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
APH1AQ96BI3 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
APH1AQ96BI3 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC16.26■□□□□ 0.19
APH1AQ96BI3 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
APH1AQ96BI3 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
APH1AQ96BI3 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.26■□□□□ 0.19
APH1AQ96BI3 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
APH1AQ96BI3 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
APH1AQ96BI3 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
APH1AQ96BI3 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.25■□□□□ 0.19
APH1AQ96BI3 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
APH1AQ96BI3 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
APH1AQ96BI3 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
APH1AQ96BI3 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
APH1AQ96BI3 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
APH1AQ96BI3 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
APH1AQ96BI3 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
APH1AQ96BI3 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.25■□□□□ 0.19
APH1AQ96BI3 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms