Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HPS1Q92902 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HPS1Q92902 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HPS1Q92902 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.82■□□□□ 0.28
HPS1Q92902 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
HPS1Q92902 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.81■□□□□ 0.28
HPS1Q92902 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HPS1Q92902 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HPS1Q92902 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HPS1Q92902 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HPS1Q92902 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HPS1Q92902 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.81■□□□□ 0.28
HPS1Q92902 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
HPS1Q92902 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
HPS1Q92902 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HPS1Q92902 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HPS1Q92902 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HPS1Q92902 FP475955.4-201ENST00000623131 1990 ntBASIC16.81■□□□□ 0.28
HPS1Q92902 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HPS1Q92902 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HPS1Q92902 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HPS1Q92902 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HPS1Q92902 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HPS1Q92902 SERF2-207ENST00000409614 582 ntTSL 2 BASIC16.81■□□□□ 0.28
HPS1Q92902 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC16.81■□□□□ 0.28
HPS1Q92902 SNORA78-201ENST00000459373 127 ntBASIC16.81■□□□□ 0.28
HPS1Q92902 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HPS1Q92902 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
HPS1Q92902 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.81■□□□□ 0.28
HPS1Q92902 PRKY-204ENST00000533551 1019 ntBASIC16.81■□□□□ 0.28
HPS1Q92902 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.81■□□□□ 0.28
HPS1Q92902 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.81■□□□□ 0.28
HPS1Q92902 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HPS1Q92902 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HPS1Q92902 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HPS1Q92902 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
HPS1Q92902 CD37-204ENST00000535669 1674 ntTSL 2 BASIC16.81■□□□□ 0.28
HPS1Q92902 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC16.81■□□□□ 0.28
HPS1Q92902 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.81■□□□□ 0.28
HPS1Q92902 AC093525.10-201ENST00000625130 1569 ntBASIC16.81■□□□□ 0.28
HPS1Q92902 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HPS1Q92902 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HPS1Q92902 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
HPS1Q92902 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
HPS1Q92902 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HPS1Q92902 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HPS1Q92902 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HPS1Q92902 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HPS1Q92902 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
HPS1Q92902 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HPS1Q92902 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HPS1Q92902 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
HPS1Q92902 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.8■□□□□ 0.28
HPS1Q92902 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HPS1Q92902 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HPS1Q92902 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
HPS1Q92902 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.8■□□□□ 0.28
HPS1Q92902 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HPS1Q92902 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
HPS1Q92902 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.8■□□□□ 0.28
HPS1Q92902 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.8■□□□□ 0.28
HPS1Q92902 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.8■□□□□ 0.28
HPS1Q92902 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
HPS1Q92902 AL121906.2-201ENST00000621597 723 ntBASIC16.8■□□□□ 0.28
HPS1Q92902 AL023875.1-201ENST00000640777 796 ntBASIC16.8■□□□□ 0.28
HPS1Q92902 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.8■□□□□ 0.28
HPS1Q92902 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HPS1Q92902 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
HPS1Q92902 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
HPS1Q92902 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HPS1Q92902 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
HPS1Q92902 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HPS1Q92902 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
HPS1Q92902 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
HPS1Q92902 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16.8■□□□□ 0.28
HPS1Q92902 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HPS1Q92902 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.8■□□□□ 0.28
HPS1Q92902 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
HPS1Q92902 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HPS1Q92902 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HPS1Q92902 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HPS1Q92902 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
HPS1Q92902 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
HPS1Q92902 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HPS1Q92902 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HPS1Q92902 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
HPS1Q92902 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.79■□□□□ 0.28
HPS1Q92902 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
HPS1Q92902 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HPS1Q92902 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HPS1Q92902 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.79■□□□□ 0.28
HPS1Q92902 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
HPS1Q92902 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
HPS1Q92902 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HPS1Q92902 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.79■□□□□ 0.28
HPS1Q92902 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.79■□□□□ 0.28
HPS1Q92902 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
HPS1Q92902 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HPS1Q92902 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.79■□□□□ 0.28
HPS1Q92902 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms