Protein–RNA interactions for Protein: Q8TC41

RNF217, Probable E3 ubiquitin-protein ligase RNF217, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF217Q8TC41 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF217Q8TC41 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF217Q8TC41 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF217Q8TC41 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RNF217Q8TC41 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF217Q8TC41 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
RNF217Q8TC41 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RNF217Q8TC41 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.71■□□□□ 0.43
RNF217Q8TC41 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RNF217Q8TC41 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.71■□□□□ 0.43
RNF217Q8TC41 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
RNF217Q8TC41 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.71■□□□□ 0.43
RNF217Q8TC41 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RNF217Q8TC41 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.71■□□□□ 0.43
RNF217Q8TC41 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.71■□□□□ 0.43
RNF217Q8TC41 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
RNF217Q8TC41 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF217Q8TC41 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF217Q8TC41 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF217Q8TC41 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
RNF217Q8TC41 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
RNF217Q8TC41 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
RNF217Q8TC41 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
RNF217Q8TC41 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
RNF217Q8TC41 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
RNF217Q8TC41 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF217Q8TC41 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF217Q8TC41 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF217Q8TC41 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF217Q8TC41 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF217Q8TC41 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RNF217Q8TC41 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.7■□□□□ 0.42
RNF217Q8TC41 AC080080.1-201ENST00000625121 2420 ntBASIC17.7■□□□□ 0.42
RNF217Q8TC41 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF217Q8TC41 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
RNF217Q8TC41 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
RNF217Q8TC41 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF217Q8TC41 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
RNF217Q8TC41 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF217Q8TC41 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.7■□□□□ 0.42
RNF217Q8TC41 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF217Q8TC41 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
RNF217Q8TC41 TUBB8P6-201ENST00000436895 1288 ntBASIC17.7■□□□□ 0.42
RNF217Q8TC41 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.7■□□□□ 0.42
RNF217Q8TC41 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.7■□□□□ 0.42
RNF217Q8TC41 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
RNF217Q8TC41 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF217Q8TC41 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF217Q8TC41 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.7■□□□□ 0.42
RNF217Q8TC41 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF217Q8TC41 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF217Q8TC41 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF217Q8TC41 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF217Q8TC41 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
RNF217Q8TC41 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.7■□□□□ 0.42
RNF217Q8TC41 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RNF217Q8TC41 KRT8P8-201ENST00000434750 1448 ntBASIC17.7■□□□□ 0.42
RNF217Q8TC41 TEX21P-204ENST00000641479 1693 ntBASIC17.7■□□□□ 0.42
RNF217Q8TC41 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RNF217Q8TC41 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.7■□□□□ 0.42
RNF217Q8TC41 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
RNF217Q8TC41 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF217Q8TC41 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF217Q8TC41 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF217Q8TC41 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF217Q8TC41 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RNF217Q8TC41 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF217Q8TC41 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF217Q8TC41 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF217Q8TC41 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
RNF217Q8TC41 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.7■□□□□ 0.42
RNF217Q8TC41 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF217Q8TC41 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF217Q8TC41 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF217Q8TC41 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF217Q8TC41 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF217Q8TC41 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF217Q8TC41 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF217Q8TC41 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.69■□□□□ 0.42
RNF217Q8TC41 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF217Q8TC41 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF217Q8TC41 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF217Q8TC41 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RNF217Q8TC41 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
RNF217Q8TC41 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF217Q8TC41 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF217Q8TC41 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF217Q8TC41 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF217Q8TC41 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF217Q8TC41 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF217Q8TC41 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.69■□□□□ 0.42
RNF217Q8TC41 RNA5SP413-201ENST00000516373 109 ntBASIC17.69■□□□□ 0.42
RNF217Q8TC41 PRKY-204ENST00000533551 1019 ntBASIC17.69■□□□□ 0.42
RNF217Q8TC41 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF217Q8TC41 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF217Q8TC41 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF217Q8TC41 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF217Q8TC41 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF217Q8TC41 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF217Q8TC41 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms