Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC148Q8NFR7 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC148Q8NFR7 AC090164.3-201ENST00000610780 2143 ntBASIC21.17■□□□□ 0.98
CCDC148Q8NFR7 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC148Q8NFR7 NEFHP1-201ENST00000412845 2629 ntBASIC21.17■□□□□ 0.98
CCDC148Q8NFR7 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC148Q8NFR7 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CCDC148Q8NFR7 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC21.17■□□□□ 0.98
CCDC148Q8NFR7 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC148Q8NFR7 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC148Q8NFR7 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC148Q8NFR7 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC21.17■□□□□ 0.98
CCDC148Q8NFR7 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC148Q8NFR7 AC063952.2-201ENST00000498792 1227 ntBASIC21.17■□□□□ 0.98
CCDC148Q8NFR7 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC148Q8NFR7 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC21.17■□□□□ 0.98
CCDC148Q8NFR7 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC21.17■□□□□ 0.98
CCDC148Q8NFR7 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC21.17■□□□□ 0.98
CCDC148Q8NFR7 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC21.17■□□□□ 0.98
CCDC148Q8NFR7 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CCDC148Q8NFR7 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CCDC148Q8NFR7 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC148Q8NFR7 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC21.17■□□□□ 0.98
CCDC148Q8NFR7 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC21.17■□□□□ 0.98
CCDC148Q8NFR7 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC148Q8NFR7 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC148Q8NFR7 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC148Q8NFR7 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC21.17■□□□□ 0.98
CCDC148Q8NFR7 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC148Q8NFR7 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC148Q8NFR7 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC148Q8NFR7 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC148Q8NFR7 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CCDC148Q8NFR7 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC21.16■□□□□ 0.98
CCDC148Q8NFR7 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC148Q8NFR7 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CCDC148Q8NFR7 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC148Q8NFR7 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC21.16■□□□□ 0.98
CCDC148Q8NFR7 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC148Q8NFR7 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC148Q8NFR7 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC148Q8NFR7 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CCDC148Q8NFR7 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC148Q8NFR7 SPDYE15P-201ENST00000424157 909 ntBASIC21.16■□□□□ 0.98
CCDC148Q8NFR7 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC21.16■□□□□ 0.98
CCDC148Q8NFR7 AC022616.7-201ENST00000525383 220 ntBASIC21.16■□□□□ 0.98
CCDC148Q8NFR7 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC21.16■□□□□ 0.98
CCDC148Q8NFR7 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CCDC148Q8NFR7 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC148Q8NFR7 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC21.16■□□□□ 0.98
CCDC148Q8NFR7 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC148Q8NFR7 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC148Q8NFR7 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC148Q8NFR7 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC148Q8NFR7 SDHAP2-201ENST00000455183 2001 ntBASIC21.16■□□□□ 0.98
CCDC148Q8NFR7 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC148Q8NFR7 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC148Q8NFR7 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CCDC148Q8NFR7 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC148Q8NFR7 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC148Q8NFR7 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC148Q8NFR7 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC148Q8NFR7 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC148Q8NFR7 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC148Q8NFR7 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC21.15■□□□□ 0.98
CCDC148Q8NFR7 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC148Q8NFR7 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC148Q8NFR7 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC21.15■□□□□ 0.98
CCDC148Q8NFR7 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC148Q8NFR7 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC21.15■□□□□ 0.98
CCDC148Q8NFR7 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
CCDC148Q8NFR7 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CCDC148Q8NFR7 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CCDC148Q8NFR7 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC148Q8NFR7 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC148Q8NFR7 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC148Q8NFR7 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC148Q8NFR7 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC148Q8NFR7 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC148Q8NFR7 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC148Q8NFR7 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC148Q8NFR7 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC148Q8NFR7 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
CCDC148Q8NFR7 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC148Q8NFR7 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC148Q8NFR7 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC148Q8NFR7 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CCDC148Q8NFR7 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC148Q8NFR7 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC148Q8NFR7 AC026471.1-201ENST00000564629 3026 ntBASIC21.15■□□□□ 0.98
CCDC148Q8NFR7 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC21.15■□□□□ 0.98
CCDC148Q8NFR7 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
CCDC148Q8NFR7 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC21.14■□□□□ 0.98
CCDC148Q8NFR7 ASL-204ENST00000395331 1538 ntTSL 5 BASIC21.14■□□□□ 0.98
CCDC148Q8NFR7 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC21.14■□□□□ 0.98
CCDC148Q8NFR7 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC148Q8NFR7 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC148Q8NFR7 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC148Q8NFR7 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC148Q8NFR7 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms