Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.29■□□□□ 0.04
CCDC168Q8NDH2 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CCDC168Q8NDH2 AC092474.2-201ENST00000424288 719 ntBASIC15.29■□□□□ 0.04
CCDC168Q8NDH2 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.29■□□□□ 0.04
CCDC168Q8NDH2 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.29■□□□□ 0.04
CCDC168Q8NDH2 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CCDC168Q8NDH2 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC15.29■□□□□ 0.04
CCDC168Q8NDH2 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC168Q8NDH2 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
CCDC168Q8NDH2 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC168Q8NDH2 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC168Q8NDH2 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.29■□□□□ 0.04
CCDC168Q8NDH2 LINC00565-201ENST00000562710 2331 ntBASIC15.29■□□□□ 0.04
CCDC168Q8NDH2 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC168Q8NDH2 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC15.29■□□□□ 0.04
CCDC168Q8NDH2 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC168Q8NDH2 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC168Q8NDH2 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC168Q8NDH2 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC15.29■□□□□ 0.04
CCDC168Q8NDH2 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CCDC168Q8NDH2 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.29■□□□□ 0.04
CCDC168Q8NDH2 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.29■□□□□ 0.04
CCDC168Q8NDH2 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.29■□□□□ 0.04
CCDC168Q8NDH2 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC168Q8NDH2 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC168Q8NDH2 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC15.29■□□□□ 0.04
CCDC168Q8NDH2 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC168Q8NDH2 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CCDC168Q8NDH2 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CCDC168Q8NDH2 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC168Q8NDH2 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC168Q8NDH2 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC168Q8NDH2 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
CCDC168Q8NDH2 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC15.29■□□□□ 0.04
CCDC168Q8NDH2 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC15.29■□□□□ 0.04
CCDC168Q8NDH2 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC168Q8NDH2 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.28■□□□□ 0.04
CCDC168Q8NDH2 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.28■□□□□ 0.04
CCDC168Q8NDH2 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.28■□□□□ 0.04
CCDC168Q8NDH2 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.28■□□□□ 0.04
CCDC168Q8NDH2 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC168Q8NDH2 Z82202.1-201ENST00000623446 1880 ntBASIC15.28■□□□□ 0.04
CCDC168Q8NDH2 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC15.28■□□□□ 0.04
CCDC168Q8NDH2 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC168Q8NDH2 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC168Q8NDH2 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC168Q8NDH2 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CCDC168Q8NDH2 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.28■□□□□ 0.04
CCDC168Q8NDH2 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC15.28■□□□□ 0.04
CCDC168Q8NDH2 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC168Q8NDH2 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CCDC168Q8NDH2 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.28■□□□□ 0.04
CCDC168Q8NDH2 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.28■□□□□ 0.04
CCDC168Q8NDH2 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.28■□□□□ 0.04
CCDC168Q8NDH2 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CCDC168Q8NDH2 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.28■□□□□ 0.04
CCDC168Q8NDH2 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC168Q8NDH2 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC168Q8NDH2 AC004817.3-201ENST00000602957 2129 ntBASIC15.28■□□□□ 0.04
CCDC168Q8NDH2 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CCDC168Q8NDH2 AC097374.2-201ENST00000618617 1306 ntBASIC15.28■□□□□ 0.04
CCDC168Q8NDH2 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC15.28■□□□□ 0.04
CCDC168Q8NDH2 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC168Q8NDH2 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.28■□□□□ 0.04
CCDC168Q8NDH2 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC168Q8NDH2 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC168Q8NDH2 MKNK2P1-201ENST00000437526 628 ntBASIC15.27■□□□□ 0.04
CCDC168Q8NDH2 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC168Q8NDH2 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC168Q8NDH2 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC168Q8NDH2 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC15.27■□□□□ 0.04
CCDC168Q8NDH2 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC15.27■□□□□ 0.04
CCDC168Q8NDH2 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC15.27■□□□□ 0.04
CCDC168Q8NDH2 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC168Q8NDH2 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC168Q8NDH2 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC168Q8NDH2 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
CCDC168Q8NDH2 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CCDC168Q8NDH2 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CCDC168Q8NDH2 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.27■□□□□ 0.03
CCDC168Q8NDH2 KATNBL1P6-202ENST00000562413 1466 ntBASIC15.27■□□□□ 0.03
CCDC168Q8NDH2 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC168Q8NDH2 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC168Q8NDH2 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC168Q8NDH2 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.27■□□□□ 0.03
CCDC168Q8NDH2 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.27■□□□□ 0.03
CCDC168Q8NDH2 AC005498.2-205ENST00000593218 784 ntBASIC15.27■□□□□ 0.03
CCDC168Q8NDH2 AL513190.1-201ENST00000621254 727 ntBASIC15.27■□□□□ 0.03
CCDC168Q8NDH2 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC168Q8NDH2 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC168Q8NDH2 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC168Q8NDH2 AC020763.4-201ENST00000623414 4170 ntBASIC15.27■□□□□ 0.03
CCDC168Q8NDH2 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC168Q8NDH2 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CCDC168Q8NDH2 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC15.27■□□□□ 0.03
CCDC168Q8NDH2 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
CCDC168Q8NDH2 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC168Q8NDH2 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC168Q8NDH2 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCDC168Q8NDH2 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms