Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC22.76■■□□□ 1.23
SMC5Q8IY18 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
SMC5Q8IY18 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
SMC5Q8IY18 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
SMC5Q8IY18 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
SMC5Q8IY18 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
SMC5Q8IY18 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
SMC5Q8IY18 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
SMC5Q8IY18 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC22.75■■□□□ 1.23
SMC5Q8IY18 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
SMC5Q8IY18 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC22.75■■□□□ 1.23
SMC5Q8IY18 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
SMC5Q8IY18 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
SMC5Q8IY18 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
SMC5Q8IY18 AC010240.3-201ENST00000607688 395 ntBASIC22.75■■□□□ 1.23
SMC5Q8IY18 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
SMC5Q8IY18 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
SMC5Q8IY18 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
SMC5Q8IY18 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
SMC5Q8IY18 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
SMC5Q8IY18 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
SMC5Q8IY18 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC22.75■■□□□ 1.23
SMC5Q8IY18 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC22.75■■□□□ 1.23
SMC5Q8IY18 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
SMC5Q8IY18 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
SMC5Q8IY18 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC22.74■■□□□ 1.23
SMC5Q8IY18 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
SMC5Q8IY18 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC22.74■■□□□ 1.23
SMC5Q8IY18 MMP23A-201ENST00000234610 1017 ntBASIC22.74■■□□□ 1.23
SMC5Q8IY18 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
SMC5Q8IY18 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
SMC5Q8IY18 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
SMC5Q8IY18 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC22.74■■□□□ 1.23
SMC5Q8IY18 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC22.74■■□□□ 1.23
SMC5Q8IY18 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
SMC5Q8IY18 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
SMC5Q8IY18 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
SMC5Q8IY18 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC22.74■■□□□ 1.23
SMC5Q8IY18 GNE-204ENST00000539208 2190 ntTSL 2 BASIC22.74■■□□□ 1.23
SMC5Q8IY18 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
SMC5Q8IY18 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
SMC5Q8IY18 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
SMC5Q8IY18 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
SMC5Q8IY18 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
SMC5Q8IY18 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
SMC5Q8IY18 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
SMC5Q8IY18 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC22.73■■□□□ 1.23
SMC5Q8IY18 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC22.73■■□□□ 1.23
SMC5Q8IY18 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC22.73■■□□□ 1.23
SMC5Q8IY18 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
SMC5Q8IY18 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
SMC5Q8IY18 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC22.73■■□□□ 1.23
SMC5Q8IY18 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
SMC5Q8IY18 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
SMC5Q8IY18 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
SMC5Q8IY18 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
SMC5Q8IY18 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
SMC5Q8IY18 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC22.73■■□□□ 1.23
SMC5Q8IY18 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC22.73■■□□□ 1.23
SMC5Q8IY18 NAPSB-206ENST00000562112 1266 ntBASIC22.73■■□□□ 1.23
SMC5Q8IY18 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
SMC5Q8IY18 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
SMC5Q8IY18 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
SMC5Q8IY18 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
SMC5Q8IY18 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
SMC5Q8IY18 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
SMC5Q8IY18 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
SMC5Q8IY18 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC22.73■■□□□ 1.23
SMC5Q8IY18 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
SMC5Q8IY18 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
SMC5Q8IY18 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC22.72■■□□□ 1.23
SMC5Q8IY18 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC22.72■■□□□ 1.23
SMC5Q8IY18 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC22.72■■□□□ 1.23
SMC5Q8IY18 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SMC5Q8IY18 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
SMC5Q8IY18 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
SMC5Q8IY18 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC22.72■■□□□ 1.23
SMC5Q8IY18 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC22.72■■□□□ 1.23
SMC5Q8IY18 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SMC5Q8IY18 AC009947.2-201ENST00000444014 672 ntBASIC22.72■■□□□ 1.23
SMC5Q8IY18 AC128688.1-201ENST00000487626 519 ntBASIC22.72■■□□□ 1.23
SMC5Q8IY18 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SMC5Q8IY18 DET1-205ENST00000558413 583 ntTSL 4 BASIC22.72■■□□□ 1.23
SMC5Q8IY18 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
SMC5Q8IY18 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
SMC5Q8IY18 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC22.72■■□□□ 1.23
SMC5Q8IY18 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
SMC5Q8IY18 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SMC5Q8IY18 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC22.72■■□□□ 1.23
SMC5Q8IY18 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
SMC5Q8IY18 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
SMC5Q8IY18 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SMC5Q8IY18 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
SMC5Q8IY18 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC22.71■■□□□ 1.23
SMC5Q8IY18 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
SMC5Q8IY18 GNAS-203ENST00000306120 1878 ntBASIC22.71■■□□□ 1.23
SMC5Q8IY18 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
SMC5Q8IY18 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SMC5Q8IY18 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
SMC5Q8IY18 CRAT-202ENST00000393384 973 ntTSL 2 BASIC22.71■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms