Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM48Q8IWZ4 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM48Q8IWZ4 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
TRIM48Q8IWZ4 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM48Q8IWZ4 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM48Q8IWZ4 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.04■□□□□ 0.48
TRIM48Q8IWZ4 AP000974.1-201ENST00000623909 2387 ntBASIC18.04■□□□□ 0.48
TRIM48Q8IWZ4 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM48Q8IWZ4 MTMR9LP-203ENST00000426597 1545 ntBASIC18.04■□□□□ 0.48
TRIM48Q8IWZ4 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.04■□□□□ 0.48
TRIM48Q8IWZ4 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.04■□□□□ 0.48
TRIM48Q8IWZ4 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM48Q8IWZ4 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM48Q8IWZ4 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM48Q8IWZ4 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM48Q8IWZ4 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM48Q8IWZ4 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.04■□□□□ 0.48
TRIM48Q8IWZ4 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM48Q8IWZ4 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM48Q8IWZ4 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.04■□□□□ 0.48
TRIM48Q8IWZ4 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM48Q8IWZ4 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM48Q8IWZ4 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.04■□□□□ 0.48
TRIM48Q8IWZ4 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.04■□□□□ 0.48
TRIM48Q8IWZ4 AL136038.4-201ENST00000603606 1261 ntBASIC18.04■□□□□ 0.48
TRIM48Q8IWZ4 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.04■□□□□ 0.48
TRIM48Q8IWZ4 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM48Q8IWZ4 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM48Q8IWZ4 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM48Q8IWZ4 PKD1P1-201ENST00000458669 6805 ntBASIC18.04■□□□□ 0.48
TRIM48Q8IWZ4 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.04■□□□□ 0.48
TRIM48Q8IWZ4 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM48Q8IWZ4 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.04■□□□□ 0.48
TRIM48Q8IWZ4 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM48Q8IWZ4 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM48Q8IWZ4 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TRIM48Q8IWZ4 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM48Q8IWZ4 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM48Q8IWZ4 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM48Q8IWZ4 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.03■□□□□ 0.48
TRIM48Q8IWZ4 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
TRIM48Q8IWZ4 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
TRIM48Q8IWZ4 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM48Q8IWZ4 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM48Q8IWZ4 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.03■□□□□ 0.48
TRIM48Q8IWZ4 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM48Q8IWZ4 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM48Q8IWZ4 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM48Q8IWZ4 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM48Q8IWZ4 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.03■□□□□ 0.48
TRIM48Q8IWZ4 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM48Q8IWZ4 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.03■□□□□ 0.48
TRIM48Q8IWZ4 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM48Q8IWZ4 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM48Q8IWZ4 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.03■□□□□ 0.48
TRIM48Q8IWZ4 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.03■□□□□ 0.48
TRIM48Q8IWZ4 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM48Q8IWZ4 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.03■□□□□ 0.48
TRIM48Q8IWZ4 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.03■□□□□ 0.48
TRIM48Q8IWZ4 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.03■□□□□ 0.48
TRIM48Q8IWZ4 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.03■□□□□ 0.48
TRIM48Q8IWZ4 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.03■□□□□ 0.48
TRIM48Q8IWZ4 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM48Q8IWZ4 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM48Q8IWZ4 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.03■□□□□ 0.48
TRIM48Q8IWZ4 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
TRIM48Q8IWZ4 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM48Q8IWZ4 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM48Q8IWZ4 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
TRIM48Q8IWZ4 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.03■□□□□ 0.48
TRIM48Q8IWZ4 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
TRIM48Q8IWZ4 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM48Q8IWZ4 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM48Q8IWZ4 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM48Q8IWZ4 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
TRIM48Q8IWZ4 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
TRIM48Q8IWZ4 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.02■□□□□ 0.48
TRIM48Q8IWZ4 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.02■□□□□ 0.48
TRIM48Q8IWZ4 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM48Q8IWZ4 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.02■□□□□ 0.48
TRIM48Q8IWZ4 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM48Q8IWZ4 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM48Q8IWZ4 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
TRIM48Q8IWZ4 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM48Q8IWZ4 AL645929.1-201ENST00000420084 975 ntBASIC18.02■□□□□ 0.48
TRIM48Q8IWZ4 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.02■□□□□ 0.48
TRIM48Q8IWZ4 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.02■□□□□ 0.48
TRIM48Q8IWZ4 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM48Q8IWZ4 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.02■□□□□ 0.48
TRIM48Q8IWZ4 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.02■□□□□ 0.48
TRIM48Q8IWZ4 MIR3180-4-201ENST00000582223 153 ntBASIC18.02■□□□□ 0.48
TRIM48Q8IWZ4 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.02■□□□□ 0.48
TRIM48Q8IWZ4 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.02■□□□□ 0.48
TRIM48Q8IWZ4 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
TRIM48Q8IWZ4 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
TRIM48Q8IWZ4 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.02■□□□□ 0.48
TRIM48Q8IWZ4 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM48Q8IWZ4 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRIM48Q8IWZ4 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
TRIM48Q8IWZ4 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms