Protein–RNA interactions for Protein: Q86TM6

SYVN1, E3 ubiquitin-protein ligase synoviolin, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1Q86TM6 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SYVN1Q86TM6 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SYVN1Q86TM6 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
SYVN1Q86TM6 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
SYVN1Q86TM6 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.08■□□□□ 0.49
SYVN1Q86TM6 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.08■□□□□ 0.49
SYVN1Q86TM6 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SYVN1Q86TM6 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SYVN1Q86TM6 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SYVN1Q86TM6 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SYVN1Q86TM6 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SYVN1Q86TM6 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SYVN1Q86TM6 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
SYVN1Q86TM6 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.08■□□□□ 0.48
SYVN1Q86TM6 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.08■□□□□ 0.48
SYVN1Q86TM6 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.08■□□□□ 0.48
SYVN1Q86TM6 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.08■□□□□ 0.48
SYVN1Q86TM6 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.08■□□□□ 0.48
SYVN1Q86TM6 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.08■□□□□ 0.48
SYVN1Q86TM6 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
SYVN1Q86TM6 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.08■□□□□ 0.48
SYVN1Q86TM6 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SYVN1Q86TM6 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.08■□□□□ 0.48
SYVN1Q86TM6 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SYVN1Q86TM6 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.08■□□□□ 0.48
SYVN1Q86TM6 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SYVN1Q86TM6 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SYVN1Q86TM6 AC135776.1-201ENST00000319817 2481 ntBASIC18.08■□□□□ 0.48
SYVN1Q86TM6 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.08■□□□□ 0.48
SYVN1Q86TM6 AC008556.1-201ENST00000610908 2040 ntBASIC18.08■□□□□ 0.48
SYVN1Q86TM6 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.08■□□□□ 0.48
SYVN1Q86TM6 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SYVN1Q86TM6 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.08■□□□□ 0.48
SYVN1Q86TM6 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SYVN1Q86TM6 AC068880.1-201ENST00000507289 2297 ntBASIC18.07■□□□□ 0.48
SYVN1Q86TM6 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYVN1Q86TM6 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
SYVN1Q86TM6 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SYVN1Q86TM6 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYVN1Q86TM6 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.07■□□□□ 0.48
SYVN1Q86TM6 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.07■□□□□ 0.48
SYVN1Q86TM6 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SYVN1Q86TM6 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYVN1Q86TM6 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYVN1Q86TM6 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYVN1Q86TM6 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYVN1Q86TM6 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
SYVN1Q86TM6 RNF152P1-201ENST00000397754 604 ntBASIC18.07■□□□□ 0.48
SYVN1Q86TM6 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYVN1Q86TM6 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.07■□□□□ 0.48
SYVN1Q86TM6 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.07■□□□□ 0.48
SYVN1Q86TM6 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.07■□□□□ 0.48
SYVN1Q86TM6 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.07■□□□□ 0.48
SYVN1Q86TM6 AL353719.1-201ENST00000566847 864 ntBASIC18.07■□□□□ 0.48
SYVN1Q86TM6 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
SYVN1Q86TM6 AL023803.3-201ENST00000615559 522 ntBASIC18.07■□□□□ 0.48
SYVN1Q86TM6 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYVN1Q86TM6 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
SYVN1Q86TM6 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYVN1Q86TM6 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SYVN1Q86TM6 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYVN1Q86TM6 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SYVN1Q86TM6 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYVN1Q86TM6 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYVN1Q86TM6 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SYVN1Q86TM6 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYVN1Q86TM6 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.06■□□□□ 0.48
SYVN1Q86TM6 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.06■□□□□ 0.48
SYVN1Q86TM6 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
SYVN1Q86TM6 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SYVN1Q86TM6 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.06■□□□□ 0.48
SYVN1Q86TM6 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
SYVN1Q86TM6 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SYVN1Q86TM6 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SYVN1Q86TM6 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.06■□□□□ 0.48
SYVN1Q86TM6 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SYVN1Q86TM6 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SYVN1Q86TM6 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SYVN1Q86TM6 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.06■□□□□ 0.48
SYVN1Q86TM6 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.06■□□□□ 0.48
SYVN1Q86TM6 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.06■□□□□ 0.48
SYVN1Q86TM6 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
SYVN1Q86TM6 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
SYVN1Q86TM6 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SYVN1Q86TM6 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.06■□□□□ 0.48
SYVN1Q86TM6 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.06■□□□□ 0.48
SYVN1Q86TM6 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SYVN1Q86TM6 AL109659.2-201ENST00000606809 1674 ntBASIC18.06■□□□□ 0.48
SYVN1Q86TM6 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SYVN1Q86TM6 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SYVN1Q86TM6 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SYVN1Q86TM6 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SYVN1Q86TM6 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
SYVN1Q86TM6 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.05■□□□□ 0.48
SYVN1Q86TM6 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.05■□□□□ 0.48
SYVN1Q86TM6 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.05■□□□□ 0.48
SYVN1Q86TM6 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SYVN1Q86TM6 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.05■□□□□ 0.48
SYVN1Q86TM6 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.05■□□□□ 0.48
SYVN1Q86TM6 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms