Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF549Q6P9A3 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF549Q6P9A3 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
ZNF549Q6P9A3 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.26■□□□□ 0.51
ZNF549Q6P9A3 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.26■□□□□ 0.51
ZNF549Q6P9A3 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF549Q6P9A3 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF549Q6P9A3 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.25■□□□□ 0.51
ZNF549Q6P9A3 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF549Q6P9A3 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF549Q6P9A3 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF549Q6P9A3 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.25■□□□□ 0.51
ZNF549Q6P9A3 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.25■□□□□ 0.51
ZNF549Q6P9A3 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.25■□□□□ 0.51
ZNF549Q6P9A3 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF549Q6P9A3 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF549Q6P9A3 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF549Q6P9A3 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF549Q6P9A3 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.25■□□□□ 0.51
ZNF549Q6P9A3 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF549Q6P9A3 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF549Q6P9A3 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF549Q6P9A3 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
ZNF549Q6P9A3 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF549Q6P9A3 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
ZNF549Q6P9A3 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.25■□□□□ 0.51
ZNF549Q6P9A3 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF549Q6P9A3 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF549Q6P9A3 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF549Q6P9A3 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF549Q6P9A3 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
ZNF549Q6P9A3 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF549Q6P9A3 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.24■□□□□ 0.51
ZNF549Q6P9A3 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
ZNF549Q6P9A3 KRT8P7-201ENST00000533003 1432 ntBASIC18.24■□□□□ 0.51
ZNF549Q6P9A3 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF549Q6P9A3 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
ZNF549Q6P9A3 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF549Q6P9A3 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF549Q6P9A3 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.24■□□□□ 0.51
ZNF549Q6P9A3 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF549Q6P9A3 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF549Q6P9A3 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF549Q6P9A3 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF549Q6P9A3 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.24■□□□□ 0.51
ZNF549Q6P9A3 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.24■□□□□ 0.51
ZNF549Q6P9A3 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
ZNF549Q6P9A3 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
ZNF549Q6P9A3 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF549Q6P9A3 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.24■□□□□ 0.51
ZNF549Q6P9A3 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF549Q6P9A3 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF549Q6P9A3 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF549Q6P9A3 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.24■□□□□ 0.51
ZNF549Q6P9A3 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.24■□□□□ 0.51
ZNF549Q6P9A3 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF549Q6P9A3 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF549Q6P9A3 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
ZNF549Q6P9A3 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF549Q6P9A3 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.23■□□□□ 0.51
ZNF549Q6P9A3 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.23■□□□□ 0.51
ZNF549Q6P9A3 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF549Q6P9A3 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.23■□□□□ 0.51
ZNF549Q6P9A3 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF549Q6P9A3 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.23■□□□□ 0.51
ZNF549Q6P9A3 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF549Q6P9A3 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.23■□□□□ 0.51
ZNF549Q6P9A3 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF549Q6P9A3 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF549Q6P9A3 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF549Q6P9A3 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF549Q6P9A3 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.23■□□□□ 0.51
ZNF549Q6P9A3 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.23■□□□□ 0.51
ZNF549Q6P9A3 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.23■□□□□ 0.51
ZNF549Q6P9A3 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF549Q6P9A3 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.23■□□□□ 0.51
ZNF549Q6P9A3 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.23■□□□□ 0.51
ZNF549Q6P9A3 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF549Q6P9A3 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.23■□□□□ 0.51
ZNF549Q6P9A3 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF549Q6P9A3 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.23■□□□□ 0.51
ZNF549Q6P9A3 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.23■□□□□ 0.51
ZNF549Q6P9A3 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.23■□□□□ 0.51
ZNF549Q6P9A3 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.23■□□□□ 0.51
ZNF549Q6P9A3 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF549Q6P9A3 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF549Q6P9A3 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF549Q6P9A3 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
ZNF549Q6P9A3 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.23■□□□□ 0.51
ZNF549Q6P9A3 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF549Q6P9A3 NOC2LP2-201ENST00000407594 1944 ntBASIC18.23■□□□□ 0.51
ZNF549Q6P9A3 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF549Q6P9A3 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.23■□□□□ 0.51
ZNF549Q6P9A3 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF549Q6P9A3 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
ZNF549Q6P9A3 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF549Q6P9A3 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.23■□□□□ 0.51
ZNF549Q6P9A3 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF549Q6P9A3 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZNF549Q6P9A3 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms