Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
PPP4R3AQ6IN85 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PPP4R3AQ6IN85 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.87■□□□□ 0.93
PPP4R3AQ6IN85 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PPP4R3AQ6IN85 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PPP4R3AQ6IN85 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PPP4R3AQ6IN85 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.87■□□□□ 0.93
PPP4R3AQ6IN85 HYMAI.1-201ENST00000620949 238 ntBASIC20.87■□□□□ 0.93
PPP4R3AQ6IN85 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PPP4R3AQ6IN85 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PPP4R3AQ6IN85 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PPP4R3AQ6IN85 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PPP4R3AQ6IN85 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PPP4R3AQ6IN85 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
PPP4R3AQ6IN85 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
PPP4R3AQ6IN85 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PPP4R3AQ6IN85 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PPP4R3AQ6IN85 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
PPP4R3AQ6IN85 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
PPP4R3AQ6IN85 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PPP4R3AQ6IN85 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PPP4R3AQ6IN85 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PPP4R3AQ6IN85 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
PPP4R3AQ6IN85 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PPP4R3AQ6IN85 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PPP4R3AQ6IN85 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
PPP4R3AQ6IN85 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
PPP4R3AQ6IN85 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PPP4R3AQ6IN85 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PPP4R3AQ6IN85 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.86■□□□□ 0.93
PPP4R3AQ6IN85 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PPP4R3AQ6IN85 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
PPP4R3AQ6IN85 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.86■□□□□ 0.93
PPP4R3AQ6IN85 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PPP4R3AQ6IN85 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.86■□□□□ 0.93
PPP4R3AQ6IN85 AL359075.1-203ENST00000462729 1002 ntBASIC20.86■□□□□ 0.93
PPP4R3AQ6IN85 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.86■□□□□ 0.93
PPP4R3AQ6IN85 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.86■□□□□ 0.93
PPP4R3AQ6IN85 AC079602.3-201ENST00000623931 403 ntBASIC20.86■□□□□ 0.93
PPP4R3AQ6IN85 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.86■□□□□ 0.93
PPP4R3AQ6IN85 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.86■□□□□ 0.93
PPP4R3AQ6IN85 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PPP4R3AQ6IN85 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PPP4R3AQ6IN85 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PPP4R3AQ6IN85 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PPP4R3AQ6IN85 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.86■□□□□ 0.93
PPP4R3AQ6IN85 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.86■□□□□ 0.93
PPP4R3AQ6IN85 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.86■□□□□ 0.93
PPP4R3AQ6IN85 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PPP4R3AQ6IN85 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PPP4R3AQ6IN85 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PPP4R3AQ6IN85 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PPP4R3AQ6IN85 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PPP4R3AQ6IN85 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.85■□□□□ 0.93
PPP4R3AQ6IN85 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.85■□□□□ 0.93
PPP4R3AQ6IN85 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PPP4R3AQ6IN85 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
PPP4R3AQ6IN85 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.85■□□□□ 0.93
PPP4R3AQ6IN85 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.85■□□□□ 0.93
PPP4R3AQ6IN85 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
PPP4R3AQ6IN85 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PPP4R3AQ6IN85 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
PPP4R3AQ6IN85 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.85■□□□□ 0.93
PPP4R3AQ6IN85 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
PPP4R3AQ6IN85 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.85■□□□□ 0.93
PPP4R3AQ6IN85 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PPP4R3AQ6IN85 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.85■□□□□ 0.93
PPP4R3AQ6IN85 AC090164.3-201ENST00000610780 2143 ntBASIC20.85■□□□□ 0.93
PPP4R3AQ6IN85 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.85■□□□□ 0.93
PPP4R3AQ6IN85 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.85■□□□□ 0.93
PPP4R3AQ6IN85 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PPP4R3AQ6IN85 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.85■□□□□ 0.93
PPP4R3AQ6IN85 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PPP4R3AQ6IN85 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PPP4R3AQ6IN85 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.85■□□□□ 0.93
PPP4R3AQ6IN85 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
PPP4R3AQ6IN85 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
PPP4R3AQ6IN85 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
PPP4R3AQ6IN85 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.85■□□□□ 0.93
PPP4R3AQ6IN85 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PPP4R3AQ6IN85 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
PPP4R3AQ6IN85 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.85■□□□□ 0.93
PPP4R3AQ6IN85 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PPP4R3AQ6IN85 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PPP4R3AQ6IN85 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.85■□□□□ 0.93
PPP4R3AQ6IN85 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PPP4R3AQ6IN85 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PPP4R3AQ6IN85 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PPP4R3AQ6IN85 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
PPP4R3AQ6IN85 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.84■□□□□ 0.93
PPP4R3AQ6IN85 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
PPP4R3AQ6IN85 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
PPP4R3AQ6IN85 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
PPP4R3AQ6IN85 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.84■□□□□ 0.93
PPP4R3AQ6IN85 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PPP4R3AQ6IN85 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PPP4R3AQ6IN85 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.84■□□□□ 0.93
PPP4R3AQ6IN85 HLA-F-220ENST00000434407 884 ntBASIC20.84■□□□□ 0.93
PPP4R3AQ6IN85 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PPP4R3AQ6IN85 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms