Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AL032819.2-201ENST00000624543 2162 ntBASIC23.07■■□□□ 1.28
RC3H1Q5TC82 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RC3H1Q5TC82 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
RC3H1Q5TC82 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RC3H1Q5TC82 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
RC3H1Q5TC82 INIP-202ENST00000374236 874 ntTSL 2 BASIC23.07■■□□□ 1.28
RC3H1Q5TC82 AC112482.1-201ENST00000492080 688 ntBASIC23.07■■□□□ 1.28
RC3H1Q5TC82 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC23.07■■□□□ 1.28
RC3H1Q5TC82 AC105339.3-201ENST00000560043 636 ntBASIC23.07■■□□□ 1.28
RC3H1Q5TC82 NKAPP1-205ENST00000585790 367 ntBASIC23.07■■□□□ 1.28
RC3H1Q5TC82 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RC3H1Q5TC82 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC23.07■■□□□ 1.28
RC3H1Q5TC82 AC107918.4-202ENST00000641623 219 ntBASIC23.07■■□□□ 1.28
RC3H1Q5TC82 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC23.07■■□□□ 1.28
RC3H1Q5TC82 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
RC3H1Q5TC82 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RC3H1Q5TC82 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC23.06■■□□□ 1.28
RC3H1Q5TC82 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RC3H1Q5TC82 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RC3H1Q5TC82 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RC3H1Q5TC82 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC23.06■■□□□ 1.28
RC3H1Q5TC82 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC23.06■■□□□ 1.28
RC3H1Q5TC82 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC23.06■■□□□ 1.28
RC3H1Q5TC82 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RC3H1Q5TC82 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
RC3H1Q5TC82 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RC3H1Q5TC82 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC23.06■■□□□ 1.28
RC3H1Q5TC82 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RC3H1Q5TC82 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
RC3H1Q5TC82 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC23.06■■□□□ 1.28
RC3H1Q5TC82 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RC3H1Q5TC82 FIS1-203ENST00000442303 631 ntTSL 3 BASIC23.06■■□□□ 1.28
RC3H1Q5TC82 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC23.06■■□□□ 1.28
RC3H1Q5TC82 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC23.06■■□□□ 1.28
RC3H1Q5TC82 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC23.06■■□□□ 1.28
RC3H1Q5TC82 AC040169.1-201ENST00000565382 521 ntBASIC23.06■■□□□ 1.28
RC3H1Q5TC82 AC010327.4-202ENST00000591484 748 ntBASIC23.06■■□□□ 1.28
RC3H1Q5TC82 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC23.06■■□□□ 1.28
RC3H1Q5TC82 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC23.06■■□□□ 1.28
RC3H1Q5TC82 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RC3H1Q5TC82 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RC3H1Q5TC82 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC23.06■■□□□ 1.28
RC3H1Q5TC82 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
RC3H1Q5TC82 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RC3H1Q5TC82 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
RC3H1Q5TC82 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RC3H1Q5TC82 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
RC3H1Q5TC82 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RC3H1Q5TC82 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC23.05■■□□□ 1.28
RC3H1Q5TC82 LINC00602-201ENST00000629776 2065 ntBASIC23.05■■□□□ 1.28
RC3H1Q5TC82 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RC3H1Q5TC82 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC23.05■■□□□ 1.28
RC3H1Q5TC82 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
RC3H1Q5TC82 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
RC3H1Q5TC82 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RC3H1Q5TC82 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
RC3H1Q5TC82 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RC3H1Q5TC82 HNRNPA1P28-201ENST00000424481 961 ntBASIC23.05■■□□□ 1.28
RC3H1Q5TC82 HMGN1P19-201ENST00000436976 333 ntBASIC23.05■■□□□ 1.28
RC3H1Q5TC82 UNC93B6-202ENST00000528242 690 ntBASIC23.05■■□□□ 1.28
RC3H1Q5TC82 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC23.05■■□□□ 1.28
RC3H1Q5TC82 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC23.05■■□□□ 1.28
RC3H1Q5TC82 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RC3H1Q5TC82 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC23.05■■□□□ 1.28
RC3H1Q5TC82 AP000867.4-201ENST00000641616 219 ntBASIC23.05■■□□□ 1.28
RC3H1Q5TC82 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC23.05■■□□□ 1.28
RC3H1Q5TC82 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RC3H1Q5TC82 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RC3H1Q5TC82 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
RC3H1Q5TC82 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC23.05■■□□□ 1.28
RC3H1Q5TC82 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RC3H1Q5TC82 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RC3H1Q5TC82 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RC3H1Q5TC82 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RC3H1Q5TC82 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RC3H1Q5TC82 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC23.04■■□□□ 1.28
RC3H1Q5TC82 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
RC3H1Q5TC82 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
RC3H1Q5TC82 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
RC3H1Q5TC82 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC23.04■■□□□ 1.28
RC3H1Q5TC82 PMS2P2-201ENST00000425039 1128 ntBASIC23.04■■□□□ 1.28
RC3H1Q5TC82 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RC3H1Q5TC82 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC23.04■■□□□ 1.28
RC3H1Q5TC82 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC23.04■■□□□ 1.28
RC3H1Q5TC82 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC23.04■■□□□ 1.28
RC3H1Q5TC82 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC23.04■■□□□ 1.28
RC3H1Q5TC82 MTDHP4-201ENST00000600287 670 ntBASIC23.04■■□□□ 1.28
RC3H1Q5TC82 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC23.04■■□□□ 1.28
RC3H1Q5TC82 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RC3H1Q5TC82 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
RC3H1Q5TC82 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC23.04■■□□□ 1.28
RC3H1Q5TC82 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC23.04■■□□□ 1.28
RC3H1Q5TC82 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
RC3H1Q5TC82 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RC3H1Q5TC82 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RC3H1Q5TC82 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RC3H1Q5TC82 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RC3H1Q5TC82 AL158211.5-201ENST00000623583 2518 ntBASIC23.03■■□□□ 1.28
RC3H1Q5TC82 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RC3H1Q5TC82 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms