Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.17■□□□□ 0.66
ATP13A4Q4VNC1 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
ATP13A4Q4VNC1 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.17■□□□□ 0.66
ATP13A4Q4VNC1 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.17■□□□□ 0.66
ATP13A4Q4VNC1 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATP13A4Q4VNC1 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATP13A4Q4VNC1 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP13A4Q4VNC1 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP13A4Q4VNC1 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP13A4Q4VNC1 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ATP13A4Q4VNC1 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.16■□□□□ 0.66
ATP13A4Q4VNC1 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.16■□□□□ 0.66
ATP13A4Q4VNC1 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ATP13A4Q4VNC1 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP13A4Q4VNC1 GMCL1P1-201ENST00000463439 1581 ntBASIC19.16■□□□□ 0.66
ATP13A4Q4VNC1 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.16■□□□□ 0.66
ATP13A4Q4VNC1 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP13A4Q4VNC1 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP13A4Q4VNC1 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ATP13A4Q4VNC1 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP13A4Q4VNC1 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP13A4Q4VNC1 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP13A4Q4VNC1 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
ATP13A4Q4VNC1 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
ATP13A4Q4VNC1 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ATP13A4Q4VNC1 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.16■□□□□ 0.66
ATP13A4Q4VNC1 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.16■□□□□ 0.66
ATP13A4Q4VNC1 AC010653.2-201ENST00000623505 997 ntBASIC19.16■□□□□ 0.66
ATP13A4Q4VNC1 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ATP13A4Q4VNC1 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP13A4Q4VNC1 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP13A4Q4VNC1 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP13A4Q4VNC1 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ATP13A4Q4VNC1 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ATP13A4Q4VNC1 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP13A4Q4VNC1 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
ATP13A4Q4VNC1 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ATP13A4Q4VNC1 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
ATP13A4Q4VNC1 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ATP13A4Q4VNC1 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP13A4Q4VNC1 AL096828.2-201ENST00000567259 1965 ntBASIC19.15■□□□□ 0.66
ATP13A4Q4VNC1 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ATP13A4Q4VNC1 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP13A4Q4VNC1 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP13A4Q4VNC1 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP13A4Q4VNC1 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
ATP13A4Q4VNC1 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
ATP13A4Q4VNC1 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
ATP13A4Q4VNC1 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ATP13A4Q4VNC1 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.15■□□□□ 0.66
ATP13A4Q4VNC1 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.15■□□□□ 0.66
ATP13A4Q4VNC1 NAPSB-206ENST00000562112 1266 ntBASIC19.15■□□□□ 0.66
ATP13A4Q4VNC1 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
ATP13A4Q4VNC1 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
ATP13A4Q4VNC1 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ATP13A4Q4VNC1 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ATP13A4Q4VNC1 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP13A4Q4VNC1 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP13A4Q4VNC1 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
ATP13A4Q4VNC1 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ATP13A4Q4VNC1 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP13A4Q4VNC1 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP13A4Q4VNC1 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ATP13A4Q4VNC1 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.15■□□□□ 0.66
ATP13A4Q4VNC1 LETM1P2-201ENST00000597330 2178 ntBASIC19.15■□□□□ 0.66
ATP13A4Q4VNC1 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP13A4Q4VNC1 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP13A4Q4VNC1 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ATP13A4Q4VNC1 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.14■□□□□ 0.66
ATP13A4Q4VNC1 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
ATP13A4Q4VNC1 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.14■□□□□ 0.66
ATP13A4Q4VNC1 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
ATP13A4Q4VNC1 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATP13A4Q4VNC1 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ATP13A4Q4VNC1 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ATP13A4Q4VNC1 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATP13A4Q4VNC1 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATP13A4Q4VNC1 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.14■□□□□ 0.65
ATP13A4Q4VNC1 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ATP13A4Q4VNC1 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.14■□□□□ 0.65
ATP13A4Q4VNC1 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ATP13A4Q4VNC1 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.14■□□□□ 0.65
ATP13A4Q4VNC1 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.14■□□□□ 0.65
ATP13A4Q4VNC1 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ATP13A4Q4VNC1 FAM87A-204ENST00000613235 858 ntBASIC19.14■□□□□ 0.65
ATP13A4Q4VNC1 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATP13A4Q4VNC1 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.14■□□□□ 0.65
ATP13A4Q4VNC1 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ATP13A4Q4VNC1 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATP13A4Q4VNC1 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATP13A4Q4VNC1 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
ATP13A4Q4VNC1 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
ATP13A4Q4VNC1 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.14■□□□□ 0.65
ATP13A4Q4VNC1 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ATP13A4Q4VNC1 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATP13A4Q4VNC1 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
ATP13A4Q4VNC1 LINC01126-201ENST00000623515 1646 ntBASIC19.14■□□□□ 0.65
ATP13A4Q4VNC1 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.14■□□□□ 0.65
ATP13A4Q4VNC1 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.14■□□□□ 0.65
ATP13A4Q4VNC1 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms