Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.35■□□□□ 0.69
PTPN20Q4JDL3 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTPN20Q4JDL3 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN20Q4JDL3 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.34■□□□□ 0.69
PTPN20Q4JDL3 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN20Q4JDL3 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN20Q4JDL3 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.34■□□□□ 0.69
PTPN20Q4JDL3 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN20Q4JDL3 SPDYE15P-201ENST00000424157 909 ntBASIC19.34■□□□□ 0.69
PTPN20Q4JDL3 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.34■□□□□ 0.69
PTPN20Q4JDL3 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN20Q4JDL3 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
PTPN20Q4JDL3 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.34■□□□□ 0.69
PTPN20Q4JDL3 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.34■□□□□ 0.69
PTPN20Q4JDL3 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.34■□□□□ 0.69
PTPN20Q4JDL3 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN20Q4JDL3 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.34■□□□□ 0.69
PTPN20Q4JDL3 AC140113.3-201ENST00000605663 199 ntBASIC19.34■□□□□ 0.69
PTPN20Q4JDL3 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN20Q4JDL3 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.34■□□□□ 0.69
PTPN20Q4JDL3 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
PTPN20Q4JDL3 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN20Q4JDL3 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.34■□□□□ 0.69
PTPN20Q4JDL3 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN20Q4JDL3 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
PTPN20Q4JDL3 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.34■□□□□ 0.69
PTPN20Q4JDL3 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN20Q4JDL3 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN20Q4JDL3 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
PTPN20Q4JDL3 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
PTPN20Q4JDL3 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN20Q4JDL3 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
PTPN20Q4JDL3 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PTPN20Q4JDL3 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.33■□□□□ 0.69
PTPN20Q4JDL3 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
PTPN20Q4JDL3 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PTPN20Q4JDL3 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PTPN20Q4JDL3 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PTPN20Q4JDL3 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.33■□□□□ 0.69
PTPN20Q4JDL3 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PTPN20Q4JDL3 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PTPN20Q4JDL3 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
PTPN20Q4JDL3 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PTPN20Q4JDL3 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PTPN20Q4JDL3 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTPN20Q4JDL3 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTPN20Q4JDL3 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
PTPN20Q4JDL3 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTPN20Q4JDL3 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
PTPN20Q4JDL3 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PTPN20Q4JDL3 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTPN20Q4JDL3 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.33■□□□□ 0.68
PTPN20Q4JDL3 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PTPN20Q4JDL3 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTPN20Q4JDL3 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.33■□□□□ 0.68
PTPN20Q4JDL3 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.33■□□□□ 0.68
PTPN20Q4JDL3 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.33■□□□□ 0.68
PTPN20Q4JDL3 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.33■□□□□ 0.68
PTPN20Q4JDL3 RN7SL850P-201ENST00000579959 291 ntBASIC19.33■□□□□ 0.68
PTPN20Q4JDL3 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PTPN20Q4JDL3 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.33■□□□□ 0.68
PTPN20Q4JDL3 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.33■□□□□ 0.68
PTPN20Q4JDL3 AL031432.5-201ENST00000641059 760 ntBASIC19.33■□□□□ 0.68
PTPN20Q4JDL3 PHGDH-209ENST00000641074 1780 ntBASIC19.33■□□□□ 0.68
PTPN20Q4JDL3 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTPN20Q4JDL3 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTPN20Q4JDL3 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PTPN20Q4JDL3 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTPN20Q4JDL3 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTPN20Q4JDL3 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
PTPN20Q4JDL3 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.33■□□□□ 0.68
PTPN20Q4JDL3 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PTPN20Q4JDL3 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
PTPN20Q4JDL3 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN20Q4JDL3 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.32■□□□□ 0.68
PTPN20Q4JDL3 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN20Q4JDL3 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
PTPN20Q4JDL3 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.32■□□□□ 0.68
PTPN20Q4JDL3 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.32■□□□□ 0.68
PTPN20Q4JDL3 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.32■□□□□ 0.68
PTPN20Q4JDL3 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.32■□□□□ 0.68
PTPN20Q4JDL3 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PTPN20Q4JDL3 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN20Q4JDL3 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN20Q4JDL3 RASA4DP-201ENST00000460726 1199 ntBASIC19.32■□□□□ 0.68
PTPN20Q4JDL3 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.32■□□□□ 0.68
PTPN20Q4JDL3 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN20Q4JDL3 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.32■□□□□ 0.68
PTPN20Q4JDL3 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
PTPN20Q4JDL3 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.32■□□□□ 0.68
PTPN20Q4JDL3 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN20Q4JDL3 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN20Q4JDL3 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN20Q4JDL3 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN20Q4JDL3 AC020763.4-201ENST00000623414 4170 ntBASIC19.32■□□□□ 0.68
PTPN20Q4JDL3 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN20Q4JDL3 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
PTPN20Q4JDL3 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN20Q4JDL3 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PTPN20Q4JDL3 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms