Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTC1Q2NKJ3 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.64■□□□□ 0.73
CTC1Q2NKJ3 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CTC1Q2NKJ3 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTC1Q2NKJ3 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CTC1Q2NKJ3 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.63■□□□□ 0.73
CTC1Q2NKJ3 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.63■□□□□ 0.73
CTC1Q2NKJ3 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CTC1Q2NKJ3 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.63■□□□□ 0.73
CTC1Q2NKJ3 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CTC1Q2NKJ3 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
CTC1Q2NKJ3 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTC1Q2NKJ3 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTC1Q2NKJ3 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTC1Q2NKJ3 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTC1Q2NKJ3 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTC1Q2NKJ3 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.63■□□□□ 0.73
CTC1Q2NKJ3 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.63■□□□□ 0.73
CTC1Q2NKJ3 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.63■□□□□ 0.73
CTC1Q2NKJ3 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.63■□□□□ 0.73
CTC1Q2NKJ3 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTC1Q2NKJ3 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.63■□□□□ 0.73
CTC1Q2NKJ3 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CTC1Q2NKJ3 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTC1Q2NKJ3 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTC1Q2NKJ3 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.63■□□□□ 0.73
CTC1Q2NKJ3 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.63■□□□□ 0.73
CTC1Q2NKJ3 KRT18P23-201ENST00000435622 1283 ntBASIC19.63■□□□□ 0.73
CTC1Q2NKJ3 FAM197Y8-203ENST00000450145 560 ntBASIC19.63■□□□□ 0.73
CTC1Q2NKJ3 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.63■□□□□ 0.73
CTC1Q2NKJ3 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.63■□□□□ 0.73
CTC1Q2NKJ3 AC106730.1-201ENST00000566722 1090 ntBASIC19.63■□□□□ 0.73
CTC1Q2NKJ3 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTC1Q2NKJ3 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CTC1Q2NKJ3 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CTC1Q2NKJ3 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTC1Q2NKJ3 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.62■□□□□ 0.73
CTC1Q2NKJ3 AL109659.2-201ENST00000606809 1674 ntBASIC19.62■□□□□ 0.73
CTC1Q2NKJ3 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTC1Q2NKJ3 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTC1Q2NKJ3 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.62■□□□□ 0.73
CTC1Q2NKJ3 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CTC1Q2NKJ3 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTC1Q2NKJ3 IGHGP-201ENST00000390555 1178 ntBASIC19.62■□□□□ 0.73
CTC1Q2NKJ3 MIR1233-2-201ENST00000408138 82 ntBASIC19.62■□□□□ 0.73
CTC1Q2NKJ3 MIR1233-1-201ENST00000408722 82 ntBASIC19.62■□□□□ 0.73
CTC1Q2NKJ3 AL031284.1-201ENST00000419297 478 ntBASIC19.62■□□□□ 0.73
CTC1Q2NKJ3 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.62■□□□□ 0.73
CTC1Q2NKJ3 RNPS1P1-201ENST00000507437 918 ntBASIC19.62■□□□□ 0.73
CTC1Q2NKJ3 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.62■□□□□ 0.73
CTC1Q2NKJ3 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC19.62■□□□□ 0.73
CTC1Q2NKJ3 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.62■□□□□ 0.73
CTC1Q2NKJ3 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTC1Q2NKJ3 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTC1Q2NKJ3 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CTC1Q2NKJ3 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTC1Q2NKJ3 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CTC1Q2NKJ3 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CTC1Q2NKJ3 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTC1Q2NKJ3 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.61■□□□□ 0.73
CTC1Q2NKJ3 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CTC1Q2NKJ3 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.61■□□□□ 0.73
CTC1Q2NKJ3 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTC1Q2NKJ3 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTC1Q2NKJ3 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.61■□□□□ 0.73
CTC1Q2NKJ3 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTC1Q2NKJ3 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTC1Q2NKJ3 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTC1Q2NKJ3 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTC1Q2NKJ3 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTC1Q2NKJ3 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.61■□□□□ 0.73
CTC1Q2NKJ3 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CTC1Q2NKJ3 KRT18P67-201ENST00000432816 1264 ntBASIC19.61■□□□□ 0.73
CTC1Q2NKJ3 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19.61■□□□□ 0.73
CTC1Q2NKJ3 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTC1Q2NKJ3 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.61■□□□□ 0.73
CTC1Q2NKJ3 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.61■□□□□ 0.73
CTC1Q2NKJ3 AC092865.5-201ENST00000545435 363 ntBASIC19.61■□□□□ 0.73
CTC1Q2NKJ3 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.61■□□□□ 0.73
CTC1Q2NKJ3 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CTC1Q2NKJ3 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.61■□□□□ 0.73
CTC1Q2NKJ3 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.61■□□□□ 0.73
CTC1Q2NKJ3 AC124864.1-201ENST00000623408 392 ntBASIC19.61■□□□□ 0.73
CTC1Q2NKJ3 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.61■□□□□ 0.73
CTC1Q2NKJ3 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CTC1Q2NKJ3 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CTC1Q2NKJ3 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.61■□□□□ 0.73
CTC1Q2NKJ3 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTC1Q2NKJ3 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CTC1Q2NKJ3 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.61■□□□□ 0.73
CTC1Q2NKJ3 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.61■□□□□ 0.73
CTC1Q2NKJ3 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTC1Q2NKJ3 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CTC1Q2NKJ3 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CTC1Q2NKJ3 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTC1Q2NKJ3 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTC1Q2NKJ3 EMD-201ENST00000369835 966 ntTSL 3 BASIC19.6■□□□□ 0.73
CTC1Q2NKJ3 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.6■□□□□ 0.73
CTC1Q2NKJ3 FAM220CP-201ENST00000395253 831 ntBASIC19.6■□□□□ 0.73
CTC1Q2NKJ3 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms