Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDH13P55290 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
CDH13P55290 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CDH13P55290 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18■□□□□ 0.47
CDH13P55290 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDH13P55290 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDH13P55290 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDH13P55290 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDH13P55290 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18■□□□□ 0.47
CDH13P55290 CRYGFP-201ENST00000418459 633 ntBASIC18■□□□□ 0.47
CDH13P55290 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDH13P55290 PENK-204ENST00000518770 863 ntTSL 2 BASIC18■□□□□ 0.47
CDH13P55290 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18■□□□□ 0.47
CDH13P55290 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CDH13P55290 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18■□□□□ 0.47
CDH13P55290 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDH13P55290 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDH13P55290 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CDH13P55290 AC138028.4-201ENST00000564984 1845 ntBASIC18■□□□□ 0.47
CDH13P55290 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18■□□□□ 0.47
CDH13P55290 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDH13P55290 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDH13P55290 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18■□□□□ 0.47
CDH13P55290 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDH13P55290 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH13P55290 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
CDH13P55290 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH13P55290 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
CDH13P55290 KRT8P50-201ENST00000562022 1438 ntBASIC17.99■□□□□ 0.47
CDH13P55290 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.99■□□□□ 0.47
CDH13P55290 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDH13P55290 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH13P55290 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH13P55290 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.99■□□□□ 0.47
CDH13P55290 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH13P55290 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CDH13P55290 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH13P55290 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.99■□□□□ 0.47
CDH13P55290 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.99■□□□□ 0.47
CDH13P55290 AC034236.2-201ENST00000606662 1610 ntBASIC17.99■□□□□ 0.47
CDH13P55290 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH13P55290 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH13P55290 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH13P55290 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH13P55290 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CDH13P55290 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.99■□□□□ 0.47
CDH13P55290 AC233702.5-201ENST00000584107 538 ntBASIC17.99■□□□□ 0.47
CDH13P55290 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.99■□□□□ 0.47
CDH13P55290 AL049637.2-201ENST00000641778 930 ntBASIC17.99■□□□□ 0.47
CDH13P55290 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH13P55290 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH13P55290 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH13P55290 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH13P55290 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.99■□□□□ 0.47
CDH13P55290 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH13P55290 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH13P55290 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH13P55290 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
CDH13P55290 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH13P55290 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH13P55290 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDH13P55290 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
CDH13P55290 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH13P55290 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDH13P55290 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
CDH13P55290 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH13P55290 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CDH13P55290 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDH13P55290 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.98■□□□□ 0.47
CDH13P55290 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.98■□□□□ 0.47
CDH13P55290 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
CDH13P55290 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.98■□□□□ 0.47
CDH13P55290 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CDH13P55290 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDH13P55290 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.98■□□□□ 0.47
CDH13P55290 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.98■□□□□ 0.47
CDH13P55290 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.98■□□□□ 0.47
CDH13P55290 MIR4674-201ENST00000582457 87 ntBASIC17.98■□□□□ 0.47
CDH13P55290 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.98■□□□□ 0.47
CDH13P55290 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.98■□□□□ 0.47
CDH13P55290 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.98■□□□□ 0.47
CDH13P55290 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.98■□□□□ 0.47
CDH13P55290 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDH13P55290 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDH13P55290 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH13P55290 AP000997.3-201ENST00000623333 2250 ntBASIC17.98■□□□□ 0.47
CDH13P55290 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH13P55290 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH13P55290 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH13P55290 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDH13P55290 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH13P55290 AC134043.2-201ENST00000624206 2238 ntBASIC17.98■□□□□ 0.47
CDH13P55290 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH13P55290 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CDH13P55290 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDH13P55290 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH13P55290 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CDH13P55290 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.97■□□□□ 0.47
CDH13P55290 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.97■□□□□ 0.47
CDH13P55290 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms