Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
ZNF140P52738 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
ZNF140P52738 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
ZNF140P52738 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF140P52738 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.3■□□□□ 0.52
ZNF140P52738 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.3■□□□□ 0.52
ZNF140P52738 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF140P52738 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.3■□□□□ 0.52
ZNF140P52738 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF140P52738 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF140P52738 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF140P52738 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF140P52738 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.29■□□□□ 0.52
ZNF140P52738 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
ZNF140P52738 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.29■□□□□ 0.52
ZNF140P52738 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF140P52738 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
ZNF140P52738 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.29■□□□□ 0.52
ZNF140P52738 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
ZNF140P52738 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF140P52738 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF140P52738 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF140P52738 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF140P52738 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
ZNF140P52738 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF140P52738 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
ZNF140P52738 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.29■□□□□ 0.52
ZNF140P52738 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF140P52738 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.29■□□□□ 0.52
ZNF140P52738 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF140P52738 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF140P52738 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF140P52738 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
ZNF140P52738 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF140P52738 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF140P52738 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF140P52738 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
ZNF140P52738 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
ZNF140P52738 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF140P52738 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF140P52738 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF140P52738 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF140P52738 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.28■□□□□ 0.52
ZNF140P52738 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.28■□□□□ 0.52
ZNF140P52738 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.28■□□□□ 0.52
ZNF140P52738 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.28■□□□□ 0.52
ZNF140P52738 RN7SL850P-201ENST00000579959 291 ntBASIC18.28■□□□□ 0.52
ZNF140P52738 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF140P52738 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.28■□□□□ 0.52
ZNF140P52738 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF140P52738 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
ZNF140P52738 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF140P52738 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF140P52738 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
ZNF140P52738 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.28■□□□□ 0.52
ZNF140P52738 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
ZNF140P52738 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
ZNF140P52738 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF140P52738 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
ZNF140P52738 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF140P52738 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF140P52738 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF140P52738 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF140P52738 AL096828.2-201ENST00000567259 1965 ntBASIC18.28■□□□□ 0.52
ZNF140P52738 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF140P52738 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.28■□□□□ 0.52
ZNF140P52738 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
ZNF140P52738 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ZNF140P52738 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZNF140P52738 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
ZNF140P52738 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
ZNF140P52738 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZNF140P52738 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
ZNF140P52738 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.27■□□□□ 0.52
ZNF140P52738 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZNF140P52738 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZNF140P52738 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZNF140P52738 RNF152P1-201ENST00000397754 604 ntBASIC18.27■□□□□ 0.52
ZNF140P52738 STARP1-201ENST00000397973 869 ntBASIC18.27■□□□□ 0.52
ZNF140P52738 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ZNF140P52738 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ZNF140P52738 AC079602.3-201ENST00000623931 403 ntBASIC18.27■□□□□ 0.52
ZNF140P52738 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZNF140P52738 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.27■□□□□ 0.52
ZNF140P52738 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.27■□□□□ 0.51
ZNF140P52738 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ZNF140P52738 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.27■□□□□ 0.51
ZNF140P52738 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.27■□□□□ 0.51
ZNF140P52738 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.27■□□□□ 0.51
ZNF140P52738 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ZNF140P52738 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
ZNF140P52738 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.26■□□□□ 0.51
ZNF140P52738 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF140P52738 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.26■□□□□ 0.51
ZNF140P52738 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF140P52738 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.26■□□□□ 0.51
ZNF140P52738 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF140P52738 AC007613.1-201ENST00000572811 2597 ntBASIC18.26■□□□□ 0.51
ZNF140P52738 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
ZNF140P52738 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms