Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GPC3P51654 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.27■□□□□ 0.84
GPC3P51654 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.27■□□□□ 0.84
GPC3P51654 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC20.27■□□□□ 0.84
GPC3P51654 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.27■□□□□ 0.84
GPC3P51654 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC20.27■□□□□ 0.84
GPC3P51654 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
GPC3P51654 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
GPC3P51654 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.27■□□□□ 0.84
GPC3P51654 AC024563.2-201ENST00000603282 481 ntBASIC20.27■□□□□ 0.84
GPC3P51654 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.27■□□□□ 0.84
GPC3P51654 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GPC3P51654 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
GPC3P51654 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GPC3P51654 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.27■□□□□ 0.84
GPC3P51654 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GPC3P51654 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.83
GPC3P51654 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
GPC3P51654 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
GPC3P51654 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.27■□□□□ 0.83
GPC3P51654 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
GPC3P51654 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.27■□□□□ 0.83
GPC3P51654 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
GPC3P51654 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
GPC3P51654 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GPC3P51654 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GPC3P51654 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.26■□□□□ 0.83
GPC3P51654 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.26■□□□□ 0.83
GPC3P51654 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
GPC3P51654 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.26■□□□□ 0.83
GPC3P51654 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GPC3P51654 AL450487.1-201ENST00000426799 995 ntBASIC20.26■□□□□ 0.83
GPC3P51654 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.26■□□□□ 0.83
GPC3P51654 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC20.26■□□□□ 0.83
GPC3P51654 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.26■□□□□ 0.83
GPC3P51654 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
GPC3P51654 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
GPC3P51654 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.26■□□□□ 0.83
GPC3P51654 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
GPC3P51654 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.26■□□□□ 0.83
GPC3P51654 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
GPC3P51654 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
GPC3P51654 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
GPC3P51654 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
GPC3P51654 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GPC3P51654 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
GPC3P51654 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GPC3P51654 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GPC3P51654 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.25■□□□□ 0.83
GPC3P51654 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
GPC3P51654 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
GPC3P51654 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
GPC3P51654 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
GPC3P51654 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.25■□□□□ 0.83
GPC3P51654 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.25■□□□□ 0.83
GPC3P51654 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GPC3P51654 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
GPC3P51654 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GPC3P51654 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GPC3P51654 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
GPC3P51654 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GPC3P51654 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
GPC3P51654 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GPC3P51654 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
GPC3P51654 IGHGP-201ENST00000390555 1178 ntBASIC20.25■□□□□ 0.83
GPC3P51654 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.25■□□□□ 0.83
GPC3P51654 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.25■□□□□ 0.83
GPC3P51654 MPI-205ENST00000562606 1052 ntTSL 3 BASIC20.25■□□□□ 0.83
GPC3P51654 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
GPC3P51654 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.25■□□□□ 0.83
GPC3P51654 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
GPC3P51654 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
GPC3P51654 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.25■□□□□ 0.83
GPC3P51654 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GPC3P51654 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
GPC3P51654 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GPC3P51654 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
GPC3P51654 KRT18P1-202ENST00000452408 1331 ntBASIC20.25■□□□□ 0.83
GPC3P51654 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.25■□□□□ 0.83
GPC3P51654 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
GPC3P51654 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GPC3P51654 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.24■□□□□ 0.83
GPC3P51654 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
GPC3P51654 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
GPC3P51654 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
GPC3P51654 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GPC3P51654 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GPC3P51654 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.24■□□□□ 0.83
GPC3P51654 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GPC3P51654 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC20.24■□□□□ 0.83
GPC3P51654 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
GPC3P51654 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20.24■□□□□ 0.83
GPC3P51654 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.24■□□□□ 0.83
GPC3P51654 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.24■□□□□ 0.83
GPC3P51654 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.24■□□□□ 0.83
GPC3P51654 TPSP2-201ENST00000561760 610 ntBASIC20.24■□□□□ 0.83
GPC3P51654 MIR3652-201ENST00000579335 131 ntBASIC20.24■□□□□ 0.83
GPC3P51654 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20.24■□□□□ 0.83
GPC3P51654 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.24■□□□□ 0.83
GPC3P51654 GPR32P1-201ENST00000601788 811 ntBASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms