Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.87■□□□□ 0.77
PDE6CP51160 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
PDE6CP51160 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.87■□□□□ 0.77
PDE6CP51160 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
PDE6CP51160 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
PDE6CP51160 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDE6CP51160 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
PDE6CP51160 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDE6CP51160 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
PDE6CP51160 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDE6CP51160 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.86■□□□□ 0.77
PDE6CP51160 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.86■□□□□ 0.77
PDE6CP51160 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
PDE6CP51160 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDE6CP51160 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDE6CP51160 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.86■□□□□ 0.77
PDE6CP51160 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDE6CP51160 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.86■□□□□ 0.77
PDE6CP51160 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.86■□□□□ 0.77
PDE6CP51160 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.86■□□□□ 0.77
PDE6CP51160 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PDE6CP51160 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.86■□□□□ 0.77
PDE6CP51160 MIR3180-5-201ENST00000583743 153 ntBASIC19.86■□□□□ 0.77
PDE6CP51160 AC139887.4-201ENST00000607877 719 ntBASIC19.86■□□□□ 0.77
PDE6CP51160 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
PDE6CP51160 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDE6CP51160 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
PDE6CP51160 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDE6CP51160 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PDE6CP51160 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.86■□□□□ 0.77
PDE6CP51160 MYLKP1-201ENST00000509077 1580 ntBASIC19.86■□□□□ 0.77
PDE6CP51160 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PDE6CP51160 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PDE6CP51160 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDE6CP51160 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDE6CP51160 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDE6CP51160 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDE6CP51160 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDE6CP51160 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.86■□□□□ 0.77
PDE6CP51160 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDE6CP51160 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDE6CP51160 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.86■□□□□ 0.77
PDE6CP51160 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PDE6CP51160 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
PDE6CP51160 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
PDE6CP51160 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
PDE6CP51160 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.85■□□□□ 0.77
PDE6CP51160 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.85■□□□□ 0.77
PDE6CP51160 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDE6CP51160 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.85■□□□□ 0.77
PDE6CP51160 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDE6CP51160 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.85■□□□□ 0.77
PDE6CP51160 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDE6CP51160 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDE6CP51160 AC034236.2-201ENST00000606662 1610 ntBASIC19.85■□□□□ 0.77
PDE6CP51160 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
PDE6CP51160 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PDE6CP51160 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDE6CP51160 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDE6CP51160 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDE6CP51160 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDE6CP51160 AC092647.4-201ENST00000457211 535 ntBASIC19.85■□□□□ 0.77
PDE6CP51160 YBX1P2-201ENST00000489612 999 ntBASIC19.85■□□□□ 0.77
PDE6CP51160 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.85■□□□□ 0.77
PDE6CP51160 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.85■□□□□ 0.77
PDE6CP51160 AC090340.1-201ENST00000620778 4980 ntBASIC19.85■□□□□ 0.77
PDE6CP51160 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDE6CP51160 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDE6CP51160 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.85■□□□□ 0.77
PDE6CP51160 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.85■□□□□ 0.77
PDE6CP51160 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDE6CP51160 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDE6CP51160 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDE6CP51160 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
PDE6CP51160 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDE6CP51160 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDE6CP51160 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PDE6CP51160 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PDE6CP51160 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PDE6CP51160 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDE6CP51160 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PDE6CP51160 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.84■□□□□ 0.77
PDE6CP51160 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDE6CP51160 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
PDE6CP51160 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDE6CP51160 AC036111.1-201ENST00000533973 1582 ntBASIC19.84■□□□□ 0.77
PDE6CP51160 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDE6CP51160 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDE6CP51160 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDE6CP51160 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
PDE6CP51160 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDE6CP51160 FAM8A6P-201ENST00000407496 1135 ntBASIC19.84■□□□□ 0.77
PDE6CP51160 TSPY5P-201ENST00000426936 936 ntBASIC19.84■□□□□ 0.77
PDE6CP51160 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.84■□□□□ 0.77
PDE6CP51160 WWOX-216ENST00000569818 525 ntBASIC19.84■□□□□ 0.77
PDE6CP51160 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.84■□□□□ 0.77
PDE6CP51160 AC140113.3-201ENST00000605663 199 ntBASIC19.84■□□□□ 0.77
PDE6CP51160 AL390961.4-201ENST00000623958 2535 ntBASIC19.84■□□□□ 0.77
PDE6CP51160 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDE6CP51160 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms