Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
USP8P40818 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP8P40818 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
USP8P40818 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP8P40818 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP8P40818 MCCD1P1-208ENST00000445732 328 ntBASIC20.03■□□□□ 0.8
USP8P40818 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP8P40818 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP8P40818 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP8P40818 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
USP8P40818 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
USP8P40818 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP8P40818 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP8P40818 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
USP8P40818 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP8P40818 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP8P40818 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP8P40818 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.02■□□□□ 0.8
USP8P40818 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP8P40818 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
USP8P40818 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP8P40818 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
USP8P40818 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.02■□□□□ 0.8
USP8P40818 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
USP8P40818 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP8P40818 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.02■□□□□ 0.8
USP8P40818 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
USP8P40818 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP8P40818 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.02■□□□□ 0.8
USP8P40818 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP8P40818 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
USP8P40818 TSPY15P-201ENST00000457163 923 ntBASIC20.02■□□□□ 0.8
USP8P40818 CA15P1-201ENST00000481698 905 ntBASIC20.02■□□□□ 0.8
USP8P40818 AC093827.2-201ENST00000512654 315 ntBASIC20.02■□□□□ 0.8
USP8P40818 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.02■□□□□ 0.8
USP8P40818 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.02■□□□□ 0.8
USP8P40818 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP8P40818 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
USP8P40818 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP8P40818 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
USP8P40818 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP8P40818 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
USP8P40818 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
USP8P40818 AL109659.2-201ENST00000606809 1674 ntBASIC20.02■□□□□ 0.8
USP8P40818 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP8P40818 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
USP8P40818 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
USP8P40818 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.02■□□□□ 0.8
USP8P40818 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
USP8P40818 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC20.02■□□□□ 0.8
USP8P40818 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
USP8P40818 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.02■□□□□ 0.79
USP8P40818 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
USP8P40818 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
USP8P40818 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP8P40818 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
USP8P40818 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP8P40818 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
USP8P40818 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP8P40818 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
USP8P40818 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP8P40818 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP8P40818 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP8P40818 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP8P40818 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP8P40818 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
USP8P40818 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.01■□□□□ 0.79
USP8P40818 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP8P40818 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.01■□□□□ 0.79
USP8P40818 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.01■□□□□ 0.79
USP8P40818 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.01■□□□□ 0.79
USP8P40818 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
USP8P40818 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
USP8P40818 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
USP8P40818 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.01■□□□□ 0.79
USP8P40818 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
USP8P40818 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
USP8P40818 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
USP8P40818 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
USP8P40818 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
USP8P40818 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20■□□□□ 0.79
USP8P40818 AL390961.4-201ENST00000623958 2535 ntBASIC20■□□□□ 0.79
USP8P40818 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
USP8P40818 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
USP8P40818 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
USP8P40818 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20■□□□□ 0.79
USP8P40818 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
USP8P40818 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20■□□□□ 0.79
USP8P40818 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
USP8P40818 FITM1-202ENST00000559294 800 ntBASIC20■□□□□ 0.79
USP8P40818 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20■□□□□ 0.79
USP8P40818 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20■□□□□ 0.79
USP8P40818 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
USP8P40818 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20■□□□□ 0.79
USP8P40818 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
USP8P40818 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
USP8P40818 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
USP8P40818 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20■□□□□ 0.79
USP8P40818 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
USP8P40818 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms