Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SLC6A4P31645 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SLC6A4P31645 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.83■□□□□ 0.61
SLC6A4P31645 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SLC6A4P31645 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SLC6A4P31645 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.83■□□□□ 0.61
SLC6A4P31645 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SLC6A4P31645 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC6A4P31645 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.83■□□□□ 0.6
SLC6A4P31645 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.83■□□□□ 0.6
SLC6A4P31645 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.83■□□□□ 0.6
SLC6A4P31645 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.83■□□□□ 0.6
SLC6A4P31645 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.83■□□□□ 0.6
SLC6A4P31645 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.83■□□□□ 0.6
SLC6A4P31645 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
SLC6A4P31645 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SLC6A4P31645 MIR3180-1-201ENST00000580374 94 ntBASIC18.83■□□□□ 0.6
SLC6A4P31645 MIR3180-3-201ENST00000584616 94 ntBASIC18.83■□□□□ 0.6
SLC6A4P31645 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.83■□□□□ 0.6
SLC6A4P31645 AC004263.2-201ENST00000617183 678 ntBASIC18.83■□□□□ 0.6
SLC6A4P31645 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.83■□□□□ 0.6
SLC6A4P31645 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC6A4P31645 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SLC6A4P31645 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC6A4P31645 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC6A4P31645 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.83■□□□□ 0.6
SLC6A4P31645 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC6A4P31645 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
SLC6A4P31645 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.83■□□□□ 0.6
SLC6A4P31645 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC6A4P31645 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC6A4P31645 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
SLC6A4P31645 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.82■□□□□ 0.6
SLC6A4P31645 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLC6A4P31645 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC6A4P31645 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLC6A4P31645 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC6A4P31645 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC6A4P31645 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC6A4P31645 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC6A4P31645 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.82■□□□□ 0.6
SLC6A4P31645 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLC6A4P31645 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SLC6A4P31645 CHCHD2P8-201ENST00000429873 447 ntBASIC18.82■□□□□ 0.6
SLC6A4P31645 HCG4P8-203ENST00000443049 980 ntBASIC18.82■□□□□ 0.6
SLC6A4P31645 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.82■□□□□ 0.6
SLC6A4P31645 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLC6A4P31645 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLC6A4P31645 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.82■□□□□ 0.6
SLC6A4P31645 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SLC6A4P31645 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.82■□□□□ 0.6
SLC6A4P31645 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC6A4P31645 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLC6A4P31645 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC6A4P31645 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC6A4P31645 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC6A4P31645 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
SLC6A4P31645 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SLC6A4P31645 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
SLC6A4P31645 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC6A4P31645 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC6A4P31645 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC6A4P31645 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC6A4P31645 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC6A4P31645 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SLC6A4P31645 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC6A4P31645 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.81■□□□□ 0.6
SLC6A4P31645 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
SLC6A4P31645 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC6A4P31645 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
SLC6A4P31645 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.81■□□□□ 0.6
SLC6A4P31645 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.81■□□□□ 0.6
SLC6A4P31645 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.81■□□□□ 0.6
SLC6A4P31645 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.81■□□□□ 0.6
SLC6A4P31645 AP002414.4-201ENST00000589764 1148 ntBASIC18.81■□□□□ 0.6
SLC6A4P31645 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
SLC6A4P31645 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC6A4P31645 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC6A4P31645 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SLC6A4P31645 AC073592.3-201ENST00000625118 1834 ntBASIC18.81■□□□□ 0.6
SLC6A4P31645 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC6A4P31645 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.81■□□□□ 0.6
SLC6A4P31645 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC6A4P31645 AL353692.3-201ENST00000407031 1396 ntBASIC18.81■□□□□ 0.6
SLC6A4P31645 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SLC6A4P31645 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC6A4P31645 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC6A4P31645 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC6A4P31645 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC6A4P31645 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.8■□□□□ 0.6
SLC6A4P31645 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SLC6A4P31645 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.8■□□□□ 0.6
SLC6A4P31645 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SLC6A4P31645 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SLC6A4P31645 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC6A4P31645 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.8■□□□□ 0.6
SLC6A4P31645 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC6A4P31645 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC6A4P31645 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC6A4P31645 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms