Protein–RNA interactions for Protein: P26441

CNTF, Ciliary neurotrophic factor, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFP26441 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.38■□□□□ 0.53
CNTFP26441 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.37■□□□□ 0.53
CNTFP26441 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.37■□□□□ 0.53
CNTFP26441 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.37■□□□□ 0.53
CNTFP26441 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.37■□□□□ 0.53
CNTFP26441 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNTFP26441 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNTFP26441 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
CNTFP26441 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNTFP26441 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CNTFP26441 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.37■□□□□ 0.53
CNTFP26441 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.37■□□□□ 0.53
CNTFP26441 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.37■□□□□ 0.53
CNTFP26441 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNTFP26441 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNTFP26441 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CNTFP26441 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CNTFP26441 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNTFP26441 GPAT2P1-201ENST00000444924 1672 ntBASIC18.37■□□□□ 0.53
CNTFP26441 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CNTFP26441 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CNTFP26441 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CNTFP26441 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CNTFP26441 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
CNTFP26441 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CNTFP26441 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CNTFP26441 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNTFP26441 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNTFP26441 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CNTFP26441 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNTFP26441 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNTFP26441 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNTFP26441 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNTFP26441 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.36■□□□□ 0.53
CNTFP26441 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CNTFP26441 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.36■□□□□ 0.53
CNTFP26441 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNTFP26441 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CNTFP26441 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CNTFP26441 SIRPAP1-201ENST00000448467 1770 ntBASIC18.36■□□□□ 0.53
CNTFP26441 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.36■□□□□ 0.53
CNTFP26441 CA15P1-201ENST00000481698 905 ntBASIC18.36■□□□□ 0.53
CNTFP26441 C1QBPP2-201ENST00000528754 825 ntBASIC18.36■□□□□ 0.53
CNTFP26441 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.36■□□□□ 0.53
CNTFP26441 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.36■□□□□ 0.53
CNTFP26441 DGCR10-201ENST00000609839 495 ntBASIC18.36■□□□□ 0.53
CNTFP26441 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CNTFP26441 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNTFP26441 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNTFP26441 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CNTFP26441 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTFP26441 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNTFP26441 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTFP26441 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNTFP26441 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CNTFP26441 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNTFP26441 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CNTFP26441 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTFP26441 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNTFP26441 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.35■□□□□ 0.53
CNTFP26441 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTFP26441 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNTFP26441 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTFP26441 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTFP26441 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.35■□□□□ 0.53
CNTFP26441 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.35■□□□□ 0.53
CNTFP26441 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTFP26441 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CNTFP26441 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTFP26441 MIR149-201ENST00000384879 89 ntBASIC18.35■□□□□ 0.53
CNTFP26441 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNTFP26441 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.35■□□□□ 0.53
CNTFP26441 MESTP1-201ENST00000404287 994 ntBASIC18.35■□□□□ 0.53
CNTFP26441 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.35■□□□□ 0.53
CNTFP26441 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.35■□□□□ 0.53
CNTFP26441 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.35■□□□□ 0.53
CNTFP26441 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.35■□□□□ 0.53
CNTFP26441 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTFP26441 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTFP26441 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTFP26441 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNTFP26441 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTFP26441 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTFP26441 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNTFP26441 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNTFP26441 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNTFP26441 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CNTFP26441 AC009102.3-201ENST00000623118 1491 ntBASIC18.34■□□□□ 0.53
CNTFP26441 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNTFP26441 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNTFP26441 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.34■□□□□ 0.53
CNTFP26441 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNTFP26441 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CNTFP26441 MIR3180-5-201ENST00000583743 153 ntBASIC18.34■□□□□ 0.53
CNTFP26441 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.34■□□□□ 0.53
CNTFP26441 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.34■□□□□ 0.53
CNTFP26441 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CNTFP26441 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNTFP26441 OR6D1P-202ENST00000641007 5290 ntBASIC18.34■□□□□ 0.53
CNTFP26441 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms