Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.18
UBCP0CG48 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBCP0CG48 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.14■□□□□ 0.17
UBCP0CG48 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBCP0CG48 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBCP0CG48 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBCP0CG48 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
UBCP0CG48 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBCP0CG48 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
UBCP0CG48 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBCP0CG48 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBCP0CG48 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBCP0CG48 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.14■□□□□ 0.17
UBCP0CG48 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.14■□□□□ 0.17
UBCP0CG48 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.14■□□□□ 0.17
UBCP0CG48 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBCP0CG48 AC008040.2-201ENST00000461049 708 ntBASIC16.14■□□□□ 0.17
UBCP0CG48 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.14■□□□□ 0.17
UBCP0CG48 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBCP0CG48 RNF121-214ENST00000533380 870 ntTSL 3 BASIC16.14■□□□□ 0.17
UBCP0CG48 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.14■□□□□ 0.17
UBCP0CG48 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.14■□□□□ 0.17
UBCP0CG48 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBCP0CG48 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBCP0CG48 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBCP0CG48 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.14■□□□□ 0.17
UBCP0CG48 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.14■□□□□ 0.17
UBCP0CG48 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
UBCP0CG48 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.14■□□□□ 0.17
UBCP0CG48 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
UBCP0CG48 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.14■□□□□ 0.17
UBCP0CG48 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBCP0CG48 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBCP0CG48 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
UBCP0CG48 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.13■□□□□ 0.17
UBCP0CG48 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBCP0CG48 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.13■□□□□ 0.17
UBCP0CG48 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.13■□□□□ 0.17
UBCP0CG48 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.13■□□□□ 0.17
UBCP0CG48 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBCP0CG48 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
UBCP0CG48 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
UBCP0CG48 AC012313.1-201ENST00000593393 3059 ntBASIC16.13■□□□□ 0.17
UBCP0CG48 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBCP0CG48 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.13■□□□□ 0.17
UBCP0CG48 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
UBCP0CG48 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
UBCP0CG48 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.13■□□□□ 0.17
UBCP0CG48 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16.13■□□□□ 0.17
UBCP0CG48 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
UBCP0CG48 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.13■□□□□ 0.17
UBCP0CG48 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.13■□□□□ 0.17
UBCP0CG48 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.13■□□□□ 0.17
UBCP0CG48 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
UBCP0CG48 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBCP0CG48 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
UBCP0CG48 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.13■□□□□ 0.17
UBCP0CG48 PKD1P1-201ENST00000458669 6805 ntBASIC16.13■□□□□ 0.17
UBCP0CG48 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
UBCP0CG48 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBCP0CG48 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.12■□□□□ 0.17
UBCP0CG48 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.12■□□□□ 0.17
UBCP0CG48 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.12■□□□□ 0.17
UBCP0CG48 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBCP0CG48 GNAS-203ENST00000306120 1878 ntBASIC16.12■□□□□ 0.17
UBCP0CG48 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.12■□□□□ 0.17
UBCP0CG48 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
UBCP0CG48 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.12■□□□□ 0.17
UBCP0CG48 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
UBCP0CG48 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.12■□□□□ 0.17
UBCP0CG48 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.12■□□□□ 0.17
UBCP0CG48 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
UBCP0CG48 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBCP0CG48 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.12■□□□□ 0.17
UBCP0CG48 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
UBCP0CG48 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.12■□□□□ 0.17
UBCP0CG48 MCCD1P1-208ENST00000445732 328 ntBASIC16.12■□□□□ 0.17
UBCP0CG48 AC011506.1-201ENST00000474329 610 ntBASIC16.12■□□□□ 0.17
UBCP0CG48 RPPH1-201ENST00000516869 333 ntBASIC16.12■□□□□ 0.17
UBCP0CG48 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
UBCP0CG48 AP000692.2-201ENST00000608391 879 ntBASIC16.12■□□□□ 0.17
UBCP0CG48 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
UBCP0CG48 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
UBCP0CG48 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBCP0CG48 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.12■□□□□ 0.17
UBCP0CG48 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
UBCP0CG48 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.12■□□□□ 0.17
UBCP0CG48 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
UBCP0CG48 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.12■□□□□ 0.17
UBCP0CG48 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBCP0CG48 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBCP0CG48 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
UBCP0CG48 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.11■□□□□ 0.17
UBCP0CG48 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.11■□□□□ 0.17
UBCP0CG48 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.11■□□□□ 0.17
UBCP0CG48 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
UBCP0CG48 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.11■□□□□ 0.17
UBCP0CG48 ESPNP-201ENST00000270691 2015 ntBASIC16.11■□□□□ 0.17
UBCP0CG48 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
UBCP0CG48 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms