Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RETP07949 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.52■□□□□ 0.56
RETP07949 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RETP07949 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RETP07949 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RETP07949 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RETP07949 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RETP07949 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RETP07949 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
RETP07949 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RETP07949 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.52■□□□□ 0.56
RETP07949 KRT18P67-201ENST00000432816 1264 ntBASIC18.52■□□□□ 0.56
RETP07949 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.52■□□□□ 0.56
RETP07949 VENTXP7-201ENST00000475503 772 ntBASIC18.52■□□□□ 0.56
RETP07949 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.52■□□□□ 0.56
RETP07949 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RETP07949 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.52■□□□□ 0.56
RETP07949 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.52■□□□□ 0.56
RETP07949 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
RETP07949 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
RETP07949 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.52■□□□□ 0.55
RETP07949 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RETP07949 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.52■□□□□ 0.55
RETP07949 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
RETP07949 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.52■□□□□ 0.55
RETP07949 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
RETP07949 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
RETP07949 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RETP07949 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RETP07949 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
RETP07949 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.51■□□□□ 0.55
RETP07949 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RETP07949 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RETP07949 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RETP07949 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RETP07949 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.51■□□□□ 0.55
RETP07949 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.51■□□□□ 0.55
RETP07949 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RETP07949 AF186996.4-201ENST00000467186 377 ntBASIC18.51■□□□□ 0.55
RETP07949 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.51■□□□□ 0.55
RETP07949 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.51■□□□□ 0.55
RETP07949 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.51■□□□□ 0.55
RETP07949 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.51■□□□□ 0.55
RETP07949 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.51■□□□□ 0.55
RETP07949 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RETP07949 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RETP07949 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.51■□□□□ 0.55
RETP07949 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.51■□□□□ 0.55
RETP07949 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RETP07949 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.5■□□□□ 0.55
RETP07949 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RETP07949 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.5■□□□□ 0.55
RETP07949 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RETP07949 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.5■□□□□ 0.55
RETP07949 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.5■□□□□ 0.55
RETP07949 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RETP07949 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RETP07949 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RETP07949 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RETP07949 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RETP07949 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RETP07949 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RETP07949 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.5■□□□□ 0.55
RETP07949 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.5■□□□□ 0.55
RETP07949 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.5■□□□□ 0.55
RETP07949 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.5■□□□□ 0.55
RETP07949 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.5■□□□□ 0.55
RETP07949 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.5■□□□□ 0.55
RETP07949 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RETP07949 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
RETP07949 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RETP07949 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.5■□□□□ 0.55
RETP07949 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.5■□□□□ 0.55
RETP07949 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.5■□□□□ 0.55
RETP07949 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.5■□□□□ 0.55
RETP07949 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RETP07949 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RETP07949 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
RETP07949 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RETP07949 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
RETP07949 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RETP07949 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RETP07949 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.49■□□□□ 0.55
RETP07949 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RETP07949 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
RETP07949 NSUN5P1-202ENST00000421140 1535 ntBASIC18.49■□□□□ 0.55
RETP07949 NSUN5P2-203ENST00000457352 1529 ntBASIC18.49■□□□□ 0.55
RETP07949 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RETP07949 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RETP07949 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
RETP07949 AL138781.2-201ENST00000617896 1843 ntBASIC18.49■□□□□ 0.55
RETP07949 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RETP07949 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.49■□□□□ 0.55
RETP07949 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RETP07949 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RETP07949 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RETP07949 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RETP07949 NUS1P2-201ENST00000417358 873 ntBASIC18.49■□□□□ 0.55
RETP07949 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RETP07949 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms