Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DQB2P05538 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DQB2P05538 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DQB2P05538 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DQB2P05538 SPDYE15P-201ENST00000424157 909 ntBASIC18.65■□□□□ 0.58
HLA-DQB2P05538 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DQB2P05538 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.65■□□□□ 0.58
HLA-DQB2P05538 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.65■□□□□ 0.58
HLA-DQB2P05538 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DQB2P05538 AL031432.5-201ENST00000641059 760 ntBASIC18.65■□□□□ 0.58
HLA-DQB2P05538 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.65■□□□□ 0.58
HLA-DQB2P05538 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DQB2P05538 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DQB2P05538 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
HLA-DQB2P05538 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
HLA-DQB2P05538 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DQB2P05538 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DQB2P05538 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HLA-DQB2P05538 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HLA-DQB2P05538 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
HLA-DQB2P05538 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.64■□□□□ 0.58
HLA-DQB2P05538 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DQB2P05538 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.64■□□□□ 0.57
HLA-DQB2P05538 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DQB2P05538 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.64■□□□□ 0.57
HLA-DQB2P05538 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DQB2P05538 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.64■□□□□ 0.57
HLA-DQB2P05538 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.64■□□□□ 0.57
HLA-DQB2P05538 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.64■□□□□ 0.57
HLA-DQB2P05538 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.64■□□□□ 0.57
HLA-DQB2P05538 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DQB2P05538 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
HLA-DQB2P05538 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
HLA-DQB2P05538 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DQB2P05538 AL390961.4-201ENST00000623958 2535 ntBASIC18.64■□□□□ 0.57
HLA-DQB2P05538 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DQB2P05538 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.64■□□□□ 0.57
HLA-DQB2P05538 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DQB2P05538 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DQB2P05538 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DQB2P05538 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
HLA-DQB2P05538 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DQB2P05538 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.64■□□□□ 0.57
HLA-DQB2P05538 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DQB2P05538 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DQB2P05538 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DQB2P05538 LINC01126-201ENST00000623515 1646 ntBASIC18.63■□□□□ 0.57
HLA-DQB2P05538 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.63■□□□□ 0.57
HLA-DQB2P05538 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DQB2P05538 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DQB2P05538 AL024508.2-201ENST00000607749 1894 ntBASIC18.63■□□□□ 0.57
HLA-DQB2P05538 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.63■□□□□ 0.57
HLA-DQB2P05538 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DQB2P05538 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DQB2P05538 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
HLA-DQB2P05538 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.63■□□□□ 0.57
HLA-DQB2P05538 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.63■□□□□ 0.57
HLA-DQB2P05538 AC104076.2-201ENST00000448912 469 ntBASIC18.63■□□□□ 0.57
HLA-DQB2P05538 RASA4DP-201ENST00000460726 1199 ntBASIC18.63■□□□□ 0.57
HLA-DQB2P05538 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.63■□□□□ 0.57
HLA-DQB2P05538 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.63■□□□□ 0.57
HLA-DQB2P05538 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.63■□□□□ 0.57
HLA-DQB2P05538 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.63■□□□□ 0.57
HLA-DQB2P05538 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.63■□□□□ 0.57
HLA-DQB2P05538 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.63■□□□□ 0.57
HLA-DQB2P05538 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
HLA-DQB2P05538 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
HLA-DQB2P05538 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DQB2P05538 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
HLA-DQB2P05538 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DQB2P05538 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
HLA-DQB2P05538 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DQB2P05538 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DQB2P05538 AC007613.1-201ENST00000572811 2597 ntBASIC18.63■□□□□ 0.57
HLA-DQB2P05538 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DQB2P05538 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DQB2P05538 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DQB2P05538 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DQB2P05538 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DQB2P05538 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DQB2P05538 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DQB2P05538 ABALON-201ENST00000629058 1903 ntBASIC18.62■□□□□ 0.57
HLA-DQB2P05538 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DQB2P05538 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DQB2P05538 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.62■□□□□ 0.57
HLA-DQB2P05538 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.62■□□□□ 0.57
HLA-DQB2P05538 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DQB2P05538 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DQB2P05538 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DQB2P05538 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DQB2P05538 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
HLA-DQB2P05538 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
HLA-DQB2P05538 AK4P3-201ENST00000418260 669 ntBASIC18.62■□□□□ 0.57
HLA-DQB2P05538 AC034232.1-201ENST00000506026 1064 ntBASIC18.62■□□□□ 0.57
HLA-DQB2P05538 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DQB2P05538 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.62■□□□□ 0.57
HLA-DQB2P05538 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.62■□□□□ 0.57
HLA-DQB2P05538 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.62■□□□□ 0.57
HLA-DQB2P05538 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
HLA-DQB2P05538 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms