Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.18■□□□□ 0.34
PDGFAP04085 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDGFAP04085 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PDGFAP04085 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PDGFAP04085 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.18■□□□□ 0.34
PDGFAP04085 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDGFAP04085 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDGFAP04085 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDGFAP04085 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDGFAP04085 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.17■□□□□ 0.34
PDGFAP04085 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDGFAP04085 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PDGFAP04085 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDGFAP04085 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDGFAP04085 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDGFAP04085 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDGFAP04085 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.17■□□□□ 0.34
PDGFAP04085 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDGFAP04085 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.17■□□□□ 0.34
PDGFAP04085 KRT18P31-201ENST00000506277 1292 ntBASIC17.17■□□□□ 0.34
PDGFAP04085 KRT8P3-201ENST00000519669 1449 ntBASIC17.17■□□□□ 0.34
PDGFAP04085 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PDGFAP04085 AL121772.3-201ENST00000610840 674 ntBASIC17.17■□□□□ 0.34
PDGFAP04085 AC023511.2-201ENST00000618803 211 ntBASIC17.17■□□□□ 0.34
PDGFAP04085 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDGFAP04085 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PDGFAP04085 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.17■□□□□ 0.34
PDGFAP04085 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.17■□□□□ 0.34
PDGFAP04085 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.17■□□□□ 0.34
PDGFAP04085 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDGFAP04085 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PDGFAP04085 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDGFAP04085 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDGFAP04085 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDGFAP04085 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDGFAP04085 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDGFAP04085 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.16■□□□□ 0.34
PDGFAP04085 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.16■□□□□ 0.34
PDGFAP04085 AL133373.2-201ENST00000623187 2828 ntBASIC17.16■□□□□ 0.34
PDGFAP04085 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDGFAP04085 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PDGFAP04085 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.16■□□□□ 0.34
PDGFAP04085 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.16■□□□□ 0.34
PDGFAP04085 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
PDGFAP04085 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.16■□□□□ 0.34
PDGFAP04085 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.16■□□□□ 0.34
PDGFAP04085 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.16■□□□□ 0.34
PDGFAP04085 AP000997.3-201ENST00000623333 2250 ntBASIC17.16■□□□□ 0.34
PDGFAP04085 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.16■□□□□ 0.34
PDGFAP04085 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
PDGFAP04085 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.16■□□□□ 0.34
PDGFAP04085 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.16■□□□□ 0.34
PDGFAP04085 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.16■□□□□ 0.34
PDGFAP04085 AC004263.2-201ENST00000617183 678 ntBASIC17.16■□□□□ 0.34
PDGFAP04085 Z83836.1-201ENST00000624605 1642 ntBASIC17.16■□□□□ 0.34
PDGFAP04085 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDGFAP04085 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDGFAP04085 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
PDGFAP04085 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PDGFAP04085 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDGFAP04085 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.16■□□□□ 0.34
PDGFAP04085 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
PDGFAP04085 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.16■□□□□ 0.34
PDGFAP04085 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDGFAP04085 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PDGFAP04085 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDGFAP04085 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PDGFAP04085 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PDGFAP04085 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
PDGFAP04085 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PDGFAP04085 AC093503.3-201ENST00000624917 2352 ntBASIC17.15■□□□□ 0.34
PDGFAP04085 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDGFAP04085 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.15■□□□□ 0.34
PDGFAP04085 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.15■□□□□ 0.34
PDGFAP04085 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
PDGFAP04085 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PDGFAP04085 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
PDGFAP04085 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDGFAP04085 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.15■□□□□ 0.34
PDGFAP04085 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDGFAP04085 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
PDGFAP04085 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.15■□□□□ 0.34
PDGFAP04085 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.15■□□□□ 0.34
PDGFAP04085 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.15■□□□□ 0.34
PDGFAP04085 AC012615.1-201ENST00000565797 1299 ntBASIC17.15■□□□□ 0.34
PDGFAP04085 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.15■□□□□ 0.34
PDGFAP04085 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDGFAP04085 SLC25A6P4-201ENST00000586535 553 ntBASIC17.15■□□□□ 0.34
PDGFAP04085 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.15■□□□□ 0.34
PDGFAP04085 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.15■□□□□ 0.34
PDGFAP04085 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.15■□□□□ 0.34
PDGFAP04085 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDGFAP04085 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.15■□□□□ 0.34
PDGFAP04085 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PDGFAP04085 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PDGFAP04085 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PDGFAP04085 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.15■□□□□ 0.34
PDGFAP04085 TCF3P1-201ENST00000423021 1937 ntBASIC17.15■□□□□ 0.34
PDGFAP04085 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.15■□□□□ 0.34
PDGFAP04085 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms