Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.28■□□□□ 0.36
SNX4O95219 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.28■□□□□ 0.36
SNX4O95219 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.28■□□□□ 0.36
SNX4O95219 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.28■□□□□ 0.36
SNX4O95219 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.28■□□□□ 0.36
SNX4O95219 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.28■□□□□ 0.36
SNX4O95219 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SNX4O95219 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.28■□□□□ 0.36
SNX4O95219 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SNX4O95219 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNX4O95219 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SNX4O95219 AC073508.3-201ENST00000619697 1419 ntBASIC17.28■□□□□ 0.36
SNX4O95219 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.28■□□□□ 0.36
SNX4O95219 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNX4O95219 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SNX4O95219 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNX4O95219 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SNX4O95219 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SNX4O95219 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SNX4O95219 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SNX4O95219 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SNX4O95219 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.27■□□□□ 0.36
SNX4O95219 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.27■□□□□ 0.36
SNX4O95219 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
SNX4O95219 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNX4O95219 WIZP1-201ENST00000531444 2299 ntBASIC17.27■□□□□ 0.36
SNX4O95219 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.27■□□□□ 0.36
SNX4O95219 AC006333.2-201ENST00000607957 2099 ntBASIC17.27■□□□□ 0.36
SNX4O95219 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SNX4O95219 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNX4O95219 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNX4O95219 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.27■□□□□ 0.36
SNX4O95219 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.27■□□□□ 0.36
SNX4O95219 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.27■□□□□ 0.36
SNX4O95219 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNX4O95219 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.27■□□□□ 0.36
SNX4O95219 TMPOP1-202ENST00000424642 1267 ntBASIC17.27■□□□□ 0.36
SNX4O95219 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.27■□□□□ 0.36
SNX4O95219 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SNX4O95219 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SNX4O95219 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.27■□□□□ 0.36
SNX4O95219 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.27■□□□□ 0.36
SNX4O95219 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SNX4O95219 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.27■□□□□ 0.36
SNX4O95219 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SNX4O95219 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNX4O95219 FP475955.4-201ENST00000623131 1990 ntBASIC17.27■□□□□ 0.36
SNX4O95219 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.27■□□□□ 0.35
SNX4O95219 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.27■□□□□ 0.35
SNX4O95219 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
SNX4O95219 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SNX4O95219 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
SNX4O95219 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNX4O95219 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
SNX4O95219 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.26■□□□□ 0.35
SNX4O95219 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
SNX4O95219 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SNX4O95219 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNX4O95219 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNX4O95219 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNX4O95219 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNX4O95219 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.26■□□□□ 0.35
SNX4O95219 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNX4O95219 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNX4O95219 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SNX4O95219 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNX4O95219 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.26■□□□□ 0.35
SNX4O95219 AC010203.1-204ENST00000548782 407 ntBASIC17.26■□□□□ 0.35
SNX4O95219 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SNX4O95219 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNX4O95219 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SNX4O95219 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.26■□□□□ 0.35
SNX4O95219 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNX4O95219 IRX1P1-201ENST00000438849 1838 ntBASIC17.26■□□□□ 0.35
SNX4O95219 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNX4O95219 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SNX4O95219 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNX4O95219 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.26■□□□□ 0.35
SNX4O95219 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.26■□□□□ 0.35
SNX4O95219 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SNX4O95219 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNX4O95219 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SNX4O95219 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.25■□□□□ 0.35
SNX4O95219 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX4O95219 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX4O95219 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.25■□□□□ 0.35
SNX4O95219 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX4O95219 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SNX4O95219 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SNX4O95219 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX4O95219 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
SNX4O95219 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX4O95219 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX4O95219 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNX4O95219 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SNX4O95219 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.25■□□□□ 0.35
SNX4O95219 BX664615.1-201ENST00000443558 458 ntBASIC17.25■□□□□ 0.35
SNX4O95219 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
SNX4O95219 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.25■□□□□ 0.35
SNX4O95219 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms