Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.42■□□□□ 0.22
CDRT1O95170 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDRT1O95170 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDRT1O95170 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDRT1O95170 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC16.41■□□□□ 0.22
CDRT1O95170 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDRT1O95170 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDRT1O95170 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDRT1O95170 CROCCP1-201ENST00000426910 5675 ntBASIC16.41■□□□□ 0.22
CDRT1O95170 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
CDRT1O95170 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDRT1O95170 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CDRT1O95170 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDRT1O95170 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.41■□□□□ 0.22
CDRT1O95170 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDRT1O95170 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.41■□□□□ 0.22
CDRT1O95170 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.41■□□□□ 0.22
CDRT1O95170 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.41■□□□□ 0.22
CDRT1O95170 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.41■□□□□ 0.22
CDRT1O95170 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDRT1O95170 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.41■□□□□ 0.22
CDRT1O95170 PFKL-212ENST00000628044 129 ntTSL 3 BASIC16.41■□□□□ 0.22
CDRT1O95170 MYC-209ENST00000641252 345 ntBASIC16.41■□□□□ 0.22
CDRT1O95170 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDRT1O95170 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDRT1O95170 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDRT1O95170 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDRT1O95170 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.41■□□□□ 0.22
CDRT1O95170 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDRT1O95170 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CDRT1O95170 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDRT1O95170 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDRT1O95170 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CDRT1O95170 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDRT1O95170 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.41■□□□□ 0.22
CDRT1O95170 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDRT1O95170 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDRT1O95170 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDRT1O95170 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.41■□□□□ 0.22
CDRT1O95170 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDRT1O95170 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDRT1O95170 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDRT1O95170 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDRT1O95170 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.4■□□□□ 0.22
CDRT1O95170 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.4■□□□□ 0.22
CDRT1O95170 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDRT1O95170 FLJ13224-201ENST00000313737 1514 ntBASIC16.4■□□□□ 0.22
CDRT1O95170 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
CDRT1O95170 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CDRT1O95170 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
CDRT1O95170 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.4■□□□□ 0.22
CDRT1O95170 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDRT1O95170 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDRT1O95170 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDRT1O95170 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC16.4■□□□□ 0.22
CDRT1O95170 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDRT1O95170 NCF1B-203ENST00000435988 1254 ntBASIC16.4■□□□□ 0.22
CDRT1O95170 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC16.4■□□□□ 0.22
CDRT1O95170 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
CDRT1O95170 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.4■□□□□ 0.22
CDRT1O95170 KRT18P16-201ENST00000510337 1294 ntBASIC16.4■□□□□ 0.22
CDRT1O95170 AC060766.5-201ENST00000590539 871 ntBASIC16.4■□□□□ 0.22
CDRT1O95170 AC120498.8-201ENST00000614275 531 ntBASIC16.4■□□□□ 0.22
CDRT1O95170 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDRT1O95170 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDRT1O95170 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
CDRT1O95170 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CDRT1O95170 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDRT1O95170 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CDRT1O95170 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CDRT1O95170 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDRT1O95170 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDRT1O95170 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDRT1O95170 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.4■□□□□ 0.22
CDRT1O95170 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.39■□□□□ 0.22
CDRT1O95170 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
CDRT1O95170 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.39■□□□□ 0.21
CDRT1O95170 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDRT1O95170 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDRT1O95170 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.39■□□□□ 0.21
CDRT1O95170 AC112777.1-201ENST00000540175 1423 ntBASIC16.39■□□□□ 0.21
CDRT1O95170 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDRT1O95170 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDRT1O95170 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDRT1O95170 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC16.39■□□□□ 0.21
CDRT1O95170 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDRT1O95170 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC16.39■□□□□ 0.21
CDRT1O95170 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDRT1O95170 TUBB8P6-201ENST00000436895 1288 ntBASIC16.39■□□□□ 0.21
CDRT1O95170 TSPY23P-201ENST00000440136 739 ntBASIC16.39■□□□□ 0.21
CDRT1O95170 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC16.39■□□□□ 0.21
CDRT1O95170 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC16.39■□□□□ 0.21
CDRT1O95170 OR2A1-AS1-207ENST00000486094 819 ntBASIC16.39■□□□□ 0.21
CDRT1O95170 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC16.39■□□□□ 0.21
CDRT1O95170 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.39■□□□□ 0.21
CDRT1O95170 AC098934.4-201ENST00000564127 592 ntBASIC16.39■□□□□ 0.21
CDRT1O95170 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC16.39■□□□□ 0.21
CDRT1O95170 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC16.39■□□□□ 0.21
CDRT1O95170 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC16.39■□□□□ 0.21
CDRT1O95170 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms