Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.51■□□□□ 0.23
UBL3O95164 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBL3O95164 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBL3O95164 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBL3O95164 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
UBL3O95164 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.51■□□□□ 0.23
UBL3O95164 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.51■□□□□ 0.23
UBL3O95164 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.51■□□□□ 0.23
UBL3O95164 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBL3O95164 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBL3O95164 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.51■□□□□ 0.23
UBL3O95164 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
UBL3O95164 AC128688.1-201ENST00000487626 519 ntBASIC16.51■□□□□ 0.23
UBL3O95164 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.51■□□□□ 0.23
UBL3O95164 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.51■□□□□ 0.23
UBL3O95164 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBL3O95164 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBL3O95164 AC116562.4-202ENST00000641738 218 ntBASIC16.51■□□□□ 0.23
UBL3O95164 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBL3O95164 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
UBL3O95164 AC073592.3-201ENST00000625118 1834 ntBASIC16.51■□□□□ 0.23
UBL3O95164 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
UBL3O95164 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBL3O95164 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
UBL3O95164 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.51■□□□□ 0.23
UBL3O95164 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBL3O95164 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
UBL3O95164 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.51■□□□□ 0.23
UBL3O95164 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBL3O95164 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBL3O95164 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
UBL3O95164 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBL3O95164 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBL3O95164 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBL3O95164 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
UBL3O95164 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBL3O95164 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBL3O95164 TSPY14P-201ENST00000303979 915 ntBASIC16.5■□□□□ 0.23
UBL3O95164 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
UBL3O95164 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.5■□□□□ 0.23
UBL3O95164 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBL3O95164 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
UBL3O95164 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.5■□□□□ 0.23
UBL3O95164 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.5■□□□□ 0.23
UBL3O95164 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBL3O95164 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBL3O95164 EGLN1P1-201ENST00000531623 762 ntBASIC16.5■□□□□ 0.23
UBL3O95164 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.5■□□□□ 0.23
UBL3O95164 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBL3O95164 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.5■□□□□ 0.23
UBL3O95164 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
UBL3O95164 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBL3O95164 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBL3O95164 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBL3O95164 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
UBL3O95164 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.5■□□□□ 0.23
UBL3O95164 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBL3O95164 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
UBL3O95164 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBL3O95164 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBL3O95164 AC139713.2-201ENST00000641328 2723 ntBASIC16.49■□□□□ 0.23
UBL3O95164 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBL3O95164 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBL3O95164 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBL3O95164 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
UBL3O95164 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
UBL3O95164 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBL3O95164 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
UBL3O95164 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
UBL3O95164 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
UBL3O95164 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
UBL3O95164 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.49■□□□□ 0.23
UBL3O95164 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBL3O95164 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.49■□□□□ 0.23
UBL3O95164 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.49■□□□□ 0.23
UBL3O95164 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.49■□□□□ 0.23
UBL3O95164 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
UBL3O95164 AC083906.6-201ENST00000641366 219 ntBASIC16.49■□□□□ 0.23
UBL3O95164 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBL3O95164 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBL3O95164 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBL3O95164 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
UBL3O95164 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
UBL3O95164 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBL3O95164 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBL3O95164 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.49■□□□□ 0.23
UBL3O95164 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.49■□□□□ 0.23
UBL3O95164 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
UBL3O95164 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBL3O95164 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.48■□□□□ 0.23
UBL3O95164 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBL3O95164 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
UBL3O95164 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBL3O95164 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.48■□□□□ 0.23
UBL3O95164 ESPNP-201ENST00000270691 2015 ntBASIC16.48■□□□□ 0.23
UBL3O95164 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBL3O95164 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBL3O95164 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
UBL3O95164 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.48■□□□□ 0.23
UBL3O95164 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms